These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
6. Large-scale appearance of ultraconserved elements in tetrapod genomes and slowdown of the molecular clock. Stephen S; Pheasant M; Makunin IV; Mattick JS Mol Biol Evol; 2008 Feb; 25(2):402-8. PubMed ID: 18056681 [TBL] [Abstract][Full Text] [Related]
7. Ubiquitous selective constraints in the Drosophila genome revealed by a genome-wide interspecies comparison. Halligan DL; Keightley PD Genome Res; 2006 Jul; 16(7):875-84. PubMed ID: 16751341 [TBL] [Abstract][Full Text] [Related]
8. Conserved Noncoding Elements Influence the Transposable Element Landscape in Drosophila. Manee MM; Jackson J; Bergman CM Genome Biol Evol; 2018 Jun; 10(6):1533-1545. PubMed ID: 29850787 [TBL] [Abstract][Full Text] [Related]
9. Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila. Inagaki S; Numata K; Kondo T; Tomita M; Yasuda K; Kanai A; Kageyama Y Genes Cells; 2005 Dec; 10(12):1163-73. PubMed ID: 16324153 [TBL] [Abstract][Full Text] [Related]
10. Positive and negative selection in murine ultraconserved noncoding elements. Halligan DL; Oliver F; Guthrie J; Stemshorn KC; Harr B; Keightley PD Mol Biol Evol; 2011 Sep; 28(9):2651-60. PubMed ID: 21478460 [TBL] [Abstract][Full Text] [Related]
11. Genomic data analysis using DNA structure: an analysis of conserved nongenic sequences and ultraconserved elements. Gardiner EJ; Hirons L; Hunter CA; Willett P J Chem Inf Model; 2006; 46(2):753-61. PubMed ID: 16563006 [TBL] [Abstract][Full Text] [Related]
12. Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements. Licastro D; Gennarino VA; Petrera F; Sanges R; Banfi S; Stupka E BMC Genomics; 2010 Mar; 11():151. PubMed ID: 20202189 [TBL] [Abstract][Full Text] [Related]
13. Genetic Variations of Ultraconserved Elements in the Human Genome. Habic A; Mattick JS; Calin GA; Krese R; Konc J; Kunej T OMICS; 2019 Nov; 23(11):549-559. PubMed ID: 31689173 [TBL] [Abstract][Full Text] [Related]
14. Mammalian ultraconserved elements are strongly depleted among segmental duplications and copy number variants. Derti A; Roth FP; Church GM; Wu CT Nat Genet; 2006 Oct; 38(10):1216-20. PubMed ID: 16998490 [TBL] [Abstract][Full Text] [Related]
15. Underreplicated regions in Drosophila melanogaster are enriched with fast-evolving genes and highly conserved noncoding sequences. Makunin IV; Kolesnikova TD; Andreyenkova NG Genome Biol Evol; 2014 Jul; 6(8):2050-60. PubMed ID: 25062918 [TBL] [Abstract][Full Text] [Related]
16. Comparison of ultra-conserved elements in drosophilids and vertebrates. Makunin IV; Shloma VV; Stephen SJ; Pheasant M; Belyakin SN PLoS One; 2013; 8(12):e82362. PubMed ID: 24349264 [TBL] [Abstract][Full Text] [Related]
17. Classification of selectively constrained DNA elements using feature vectors and rule-based classifiers. Polychronopoulos D; Weitschek E; Dimitrieva S; Bucher P; Felici G; Almirantis Y Genomics; 2014 Aug; 104(2):79-86. PubMed ID: 25058025 [TBL] [Abstract][Full Text] [Related]