310 related articles for article (PubMed ID: 25619996)
1. protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences.
Xiao N; Cao DS; Zhu MF; Xu QS
Bioinformatics; 2015 Jun; 31(11):1857-9. PubMed ID: 25619996
[TBL] [Abstract][Full Text] [Related]
2. iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences.
Chen Z; Zhao P; Li F; Leier A; Marquez-Lago TT; Wang Y; Webb GI; Smith AI; Daly RJ; Chou KC; Song J
Bioinformatics; 2018 Jul; 34(14):2499-2502. PubMed ID: 29528364
[TBL] [Abstract][Full Text] [Related]
3. propy: a tool to generate various modes of Chou's PseAAC.
Cao DS; Xu QS; Liang YZ
Bioinformatics; 2013 Apr; 29(7):960-2. PubMed ID: 23426256
[TBL] [Abstract][Full Text] [Related]
4. PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence.
Li ZR; Lin HH; Han LY; Jiang L; Chen X; Chen YZ
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W32-7. PubMed ID: 16845018
[TBL] [Abstract][Full Text] [Related]
5. MODEL-molecular descriptor lab: a web-based server for computing structural and physicochemical features of compounds.
Li ZR; Han LY; Xue Y; Yap CW; Li H; Jiang L; Chen YZ
Biotechnol Bioeng; 2007 Jun; 97(2):389-96. PubMed ID: 17013940
[TBL] [Abstract][Full Text] [Related]
6. DescFold: a web server for protein fold recognition.
Yan RX; Si JN; Wang C; Zhang Z
BMC Bioinformatics; 2009 Dec; 10():416. PubMed ID: 20003426
[TBL] [Abstract][Full Text] [Related]
7. APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
Armougom F; Poirot O; Moretti S; Higgins DG; Bucher P; Keduas V; Notredame C
Bioinformatics; 2006 Oct; 22(19):2439-40. PubMed ID: 17032685
[TBL] [Abstract][Full Text] [Related]
8. Update of PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence.
Rao HB; Zhu F; Yang GB; Li ZR; Chen YZ
Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W385-90. PubMed ID: 21609959
[TBL] [Abstract][Full Text] [Related]
9. ProBias: a web-server for the identification of user-specified types of compositionally biased segments in protein sequences.
Kuznetsov IB
Bioinformatics; 2008 Jul; 24(13):1534-5. PubMed ID: 18480099
[TBL] [Abstract][Full Text] [Related]
10. MAGOS: multiple alignment and modelling server.
Garnier N; Friedrich A; Bolze R; Bettler E; Moulinier L; Geourjon C; Thompson JD; Deléage G; Poch O
Bioinformatics; 2006 Sep; 22(17):2164-5. PubMed ID: 16820425
[TBL] [Abstract][Full Text] [Related]
11. ggseqlogo: a versatile R package for drawing sequence logos.
Wagih O
Bioinformatics; 2017 Nov; 33(22):3645-3647. PubMed ID: 29036507
[TBL] [Abstract][Full Text] [Related]
12. POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix.
Shimizu K; Hirose S; Noguchi T
Bioinformatics; 2007 Sep; 23(17):2337-8. PubMed ID: 17599940
[TBL] [Abstract][Full Text] [Related]
13. PR2ALIGN: a stand-alone software program and a web-server for protein sequence alignment using weighted biochemical properties of amino acids.
Kuznetsov IB; McDuffie M
BMC Res Notes; 2015 May; 8():187. PubMed ID: 25947299
[TBL] [Abstract][Full Text] [Related]
14. COPid: composition based protein identification.
Kumar M; Thakur V; Raghava GP
In Silico Biol; 2008; 8(2):121-8. PubMed ID: 18928200
[TBL] [Abstract][Full Text] [Related]
15. POSSUM: a bioinformatics toolkit for generating numerical sequence feature descriptors based on PSSM profiles.
Wang J; Yang B; Revote J; Leier A; Marquez-Lago TT; Webb G; Song J; Chou KC; Lithgow T
Bioinformatics; 2017 Sep; 33(17):2756-2758. PubMed ID: 28903538
[TBL] [Abstract][Full Text] [Related]
16. RNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.
Li Y; Shi X; Liang Y; Xie J; Zhang Y; Ma Q
BMC Bioinformatics; 2017 Jan; 18(1):51. PubMed ID: 28109252
[TBL] [Abstract][Full Text] [Related]
17. FoldUnfold: web server for the prediction of disordered regions in protein chain.
Galzitskaya OV; Garbuzynskiy SO; Lobanov MY
Bioinformatics; 2006 Dec; 22(23):2948-9. PubMed ID: 17021161
[TBL] [Abstract][Full Text] [Related]
18. Rcpi: R/Bioconductor package to generate various descriptors of proteins, compounds and their interactions.
Cao DS; Xiao N; Xu QS; Chen AF
Bioinformatics; 2015 Jan; 31(2):279-81. PubMed ID: 25246429
[TBL] [Abstract][Full Text] [Related]
19. AutoMotif server: prediction of single residue post-translational modifications in proteins.
Plewczynski D; Tkacz A; Wyrwicz LS; Rychlewski L
Bioinformatics; 2005 May; 21(10):2525-7. PubMed ID: 15728119
[TBL] [Abstract][Full Text] [Related]
20. Parmodel: a web server for automated comparative modeling of proteins.
Uchôa HB; Jorge GE; Freitas Da Silveira NJ; Camera JC; Canduri F; De Azevedo WF
Biochem Biophys Res Commun; 2004 Dec; 325(4):1481-6. PubMed ID: 15555595
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
