2280 related articles for article (PubMed ID: 25633503)
21. Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.
Díaz-Uriarte R; Alibés A; Morrissey ER; Cañada A; Rueda OM; Neves ML
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W75-80. PubMed ID: 17488846
[TBL] [Abstract][Full Text] [Related]
22. Bioinformatics analysis of microarray data.
Zhang Y; Szustakowski J; Schinke M
Methods Mol Biol; 2009; 573():259-84. PubMed ID: 19763933
[TBL] [Abstract][Full Text] [Related]
23. Sushi.R: flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures.
Phanstiel DH; Boyle AP; Araya CL; Snyder MP
Bioinformatics; 2014 Oct; 30(19):2808-10. PubMed ID: 24903420
[TBL] [Abstract][Full Text] [Related]
24. R classes and methods for SNP array data.
Scharpf RB; Ruczinski I
Methods Mol Biol; 2010; 593():67-79. PubMed ID: 19957145
[TBL] [Abstract][Full Text] [Related]
25. PYCHEM: a multivariate analysis package for python.
Jarvis RM; Broadhurst D; Johnson H; O'Boyle NM; Goodacre R
Bioinformatics; 2006 Oct; 22(20):2565-6. PubMed ID: 16882648
[TBL] [Abstract][Full Text] [Related]
26. GenomeGraphs: integrated genomic data visualization with R.
Durinck S; Bullard J; Spellman PT; Dudoit S
BMC Bioinformatics; 2009 Jan; 10():2. PubMed ID: 19123956
[TBL] [Abstract][Full Text] [Related]
27. HDBStat!: a platform-independent software suite for statistical analysis of high dimensional biology data.
Trivedi P; Edwards JW; Wang J; Gadbury GL; Srinivasasainagendra V; Zakharkin SO; Kim K; Mehta T; Brand JP; Patki A; Page GP; Allison DB
BMC Bioinformatics; 2005 Apr; 6():86. PubMed ID: 15813968
[TBL] [Abstract][Full Text] [Related]
28. Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
Chiang T; Li N; Orchard S; Kerrien S; Hermjakob H; Gentleman R; Huber W
Bioinformatics; 2008 Apr; 24(8):1100-1. PubMed ID: 17989096
[TBL] [Abstract][Full Text] [Related]
29. netboxr: Automated discovery of biological process modules by network analysis in R.
Liu EM; Luna A; Dong G; Sander C
PLoS One; 2020; 15(11):e0234669. PubMed ID: 33137091
[TBL] [Abstract][Full Text] [Related]
30. web cellHTS2: a web-application for the analysis of high-throughput screening data.
Pelz O; Gilsdorf M; Boutros M
BMC Bioinformatics; 2010 Apr; 11():185. PubMed ID: 20385013
[TBL] [Abstract][Full Text] [Related]
31. BatchQC: interactive software for evaluating sample and batch effects in genomic data.
Manimaran S; Selby HM; Okrah K; Ruberman C; Leek JT; Quackenbush J; Haibe-Kains B; Bravo HC; Johnson WE
Bioinformatics; 2016 Dec; 32(24):3836-3838. PubMed ID: 27540268
[TBL] [Abstract][Full Text] [Related]
32. flowCore: a Bioconductor package for high throughput flow cytometry.
Hahne F; LeMeur N; Brinkman RR; Ellis B; Haaland P; Sarkar D; Spidlen J; Strain E; Gentleman R
BMC Bioinformatics; 2009 Apr; 10():106. PubMed ID: 19358741
[TBL] [Abstract][Full Text] [Related]
33. The ERATO Systems Biology Workbench: enabling interaction and exchange between software tools for computational biology.
Hucka M; Finney A; Sauro HM; Bolouri H; Doyle J; Kitano H
Pac Symp Biocomput; 2002; ():450-61. PubMed ID: 11928498
[TBL] [Abstract][Full Text] [Related]
34. Plotgardener: cultivating precise multi-panel figures in R.
Kramer NE; Davis ES; Wenger CD; Deoudes EM; Parker SM; Love MI; Phanstiel DH
Bioinformatics; 2022 Mar; 38(7):2042-2045. PubMed ID: 35134826
[TBL] [Abstract][Full Text] [Related]
35. regioneR: an R/Bioconductor package for the association analysis of genomic regions based on permutation tests.
Gel B; Díez-Villanueva A; Serra E; Buschbeck M; Peinado MA; Malinverni R
Bioinformatics; 2016 Jan; 32(2):289-91. PubMed ID: 26424858
[TBL] [Abstract][Full Text] [Related]
36. MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.
Chu VT; Gottardo R; Raftery AE; Bumgarner RE; Yeung KY
Genome Biol; 2008; 9(7):R118. PubMed ID: 18652698
[TBL] [Abstract][Full Text] [Related]
37. GUItars: a GUI tool for analysis of high-throughput RNA interference screening data.
Goktug AN; Ong SS; Chen T
PLoS One; 2012; 7(11):e49386. PubMed ID: 23185323
[TBL] [Abstract][Full Text] [Related]
38. OPENMENDEL: a cooperative programming project for statistical genetics.
Zhou H; Sinsheimer JS; Bates DM; Chu BB; German CA; Ji SS; Keys KL; Kim J; Ko S; Mosher GD; Papp JC; Sobel EM; Zhai J; Zhou JJ; Lange K
Hum Genet; 2020 Jan; 139(1):61-71. PubMed ID: 30915546
[TBL] [Abstract][Full Text] [Related]
39. funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data.
Kolberg L; Kuzmin I; Adler P; Vilo J; Peterson H
BMC Genomics; 2018 Nov; 19(1):817. PubMed ID: 30428831
[TBL] [Abstract][Full Text] [Related]
40. Gonomics: uniting high performance and readability for genomics with Go.
Au EH; Fauci C; Luo Y; Mangan RJ; Snellings DA; Shoben CR; Weaver S; Simpson SK; Lowe CB
Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37624924
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
