These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

100 related articles for article (PubMed ID: 25635264)

  • 1. Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study.
    Azuaje F; Bodenreider O
    BIBE 2004; 2004 May; 2004():317-324. PubMed ID: 25635264
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Gene Expression Correlation and Gene Ontology-Based Similarity: An Assessment of Quantitative Relationships.
    Wang H; Azuaje F; Bodenreider O; Dopazo J
    Proc IEEE Symp Comput Intell Bioinforma Comput Biol; 2004 Oct; 2004():25-31. PubMed ID: 25664345
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An information theoretic approach to assessing Gene-Ontology-driven similarity and its application.
    Wang H; Azuaje F; Zheng H
    Int J Data Min Bioinform; 2014; 9(2):121-34. PubMed ID: 24864374
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GO functional similarity clustering depends on similarity measure, clustering method, and annotation completeness.
    Liu M; Thomas PD
    BMC Bioinformatics; 2019 Mar; 20(1):155. PubMed ID: 30917779
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Gene Ontology semantic similarity tools: survey on features and challenges for biological knowledge discovery.
    Mazandu GK; Chimusa ER; Mulder NJ
    Brief Bioinform; 2017 Sep; 18(5):886-901. PubMed ID: 27473066
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A relation based measure of semantic similarity for Gene Ontology annotations.
    Sheehan B; Quigley A; Gaudin B; Dobson S
    BMC Bioinformatics; 2008 Nov; 9():468. PubMed ID: 18983678
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Exploring information from the topology beneath the Gene Ontology terms to improve semantic similarity measures.
    Zhang SB; Lai JH
    Gene; 2016 Jul; 586(1):148-57. PubMed ID: 27080954
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The effects of shared information on semantic calculations in the gene ontology.
    Bible PW; Sun HW; Morasso MI; Loganantharaj R; Wei L
    Comput Struct Biotechnol J; 2017; 15():195-211. PubMed ID: 28217262
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Correlation between gene expression and GO semantic similarity.
    Sevilla JL; Segura V; Podhorski A; Guruceaga E; Mato JM; Martínez-Cruz LA; Corrales FJ; Rubio A
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(4):330-8. PubMed ID: 17044170
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Finding disease similarity based on implicit semantic similarity.
    Mathur S; Dinakarpandian D
    J Biomed Inform; 2012 Apr; 45(2):363-71. PubMed ID: 22166490
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Improving the measurement of semantic similarity by combining gene ontology and co-functional network: a random walk based approach.
    Peng J; Zhang X; Hui W; Lu J; Li Q; Liu S; Shang X
    BMC Syst Biol; 2018 Mar; 12(Suppl 2):18. PubMed ID: 29560823
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Aggregating the syntactic and semantic similarity of healthcare data towards their transformation to HL7 FHIR through ontology matching.
    Kiourtis A; Nifakos S; Mavrogiorgou A; Kyriazis D
    Int J Med Inform; 2019 Dec; 132():104002. PubMed ID: 31629311
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Ontology-driven approaches to analyzing data in functional genomics.
    Azuaje F; Al-Shahrour F; Dopazo J
    Methods Mol Biol; 2006; 316():67-86. PubMed ID: 16671401
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A-DaGO-Fun: an adaptable Gene Ontology semantic similarity-based functional analysis tool.
    Mazandu GK; Chimusa ER; Mbiyavanga M; Mulder NJ
    Bioinformatics; 2016 Feb; 32(3):477-9. PubMed ID: 26476781
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Interspecies gene function prediction using semantic similarity.
    Yu G; Luo W; Fu G; Wang J
    BMC Syst Biol; 2016 Dec; 10(Suppl 4):121. PubMed ID: 28155711
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty.
    Yang H; Nepusz T; Paccanaro A
    Bioinformatics; 2012 May; 28(10):1383-9. PubMed ID: 22522134
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions.
    Azuaje F; Wang H; Zheng H; Bodenreider O; Chesneau A
    Proc IEEE Int Conf Data Min; 2006 Dec; 2006():114-119. PubMed ID: 25698910
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data.
    Xu T; Du L; Zhou Y
    BMC Bioinformatics; 2008 Nov; 9():472. PubMed ID: 18986551
    [TBL] [Abstract][Full Text] [Related]  

  • 19. TopoICSim: a new semantic similarity measure based on gene ontology.
    Ehsani R; Drabløs F
    BMC Bioinformatics; 2016 Jul; 17(1):296. PubMed ID: 27473391
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Measure the Semantic Similarity of GO Terms Using Aggregate Information Content.
    Song X; Li L; Srimani PK; Yu PS; Wang JZ
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(3):468-76. PubMed ID: 26356015
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.