These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

214 related articles for article (PubMed ID: 25637660)

  • 1. A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy.
    Sorzano CO; Vargas J; de la Rosa-Trevín JM; Otón J; Álvarez-Cabrera AL; Abrishami V; Sesmero E; Marabini R; Carazo JM
    J Struct Biol; 2015 Mar; 189(3):213-9. PubMed ID: 25637660
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Efficient initial volume determination from electron microscopy images of single particles.
    Vargas J; Álvarez-Cabrera AL; Marabini R; Carazo JM; Sorzano CO
    Bioinformatics; 2014 Oct; 30(20):2891-8. PubMed ID: 24974203
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Alignment of direct detection device micrographs using a robust Optical Flow approach.
    Abrishami V; Vargas J; Li X; Cheng Y; Marabini R; Sorzano CÓ; Carazo JM
    J Struct Biol; 2015 Mar; 189(3):163-76. PubMed ID: 25681631
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy.
    de la Rosa-Trevín JM; Quintana A; Del Cano L; Zaldívar A; Foche I; Gutiérrez J; Gómez-Blanco J; Burguet-Castell J; Cuenca-Alba J; Abrishami V; Vargas J; Otón J; Sharov G; Vilas JL; Navas J; Conesa P; Kazemi M; Marabini R; Sorzano CO; Carazo JM
    J Struct Biol; 2016 Jul; 195(1):93-9. PubMed ID: 27108186
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol.
    Sorzano CO; de la Rosa-Trevín JM; Tama F; Jonić S
    J Struct Biol; 2014 Nov; 188(2):134-41. PubMed ID: 25268657
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Introduction to 3D reconstruction of macromolecules using single particle electron microscopy.
    Llorca O
    Acta Pharmacol Sin; 2005 Oct; 26(10):1153-64. PubMed ID: 16174429
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fast multiscale reconstruction for Cryo-EM.
    Donati L; Nilchian M; Sorzano COS; Unser M
    J Struct Biol; 2018 Dec; 204(3):543-554. PubMed ID: 30261282
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods.
    Sorzano COS; Jiménez-Moreno A; Maluenda D; Ramírez-Aportela E; Martínez M; Cuervo A; Melero R; Conesa JJ; Sánchez-García R; Strelak D; Filipovic J; Fernández-Giménez E; de Isidro-Gómez F; Herreros D; Conesa P; Del Caño L; Fonseca Y; de la Morena JJ; Macías JR; Losana P; Marabini R; Carazo JM
    Methods Mol Biol; 2021; 2305():257-289. PubMed ID: 33950394
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A Robust Single-Particle Cryo-Electron Microscopy (cryo-EM) Processing Workflow with cryoSPARC, RELION, and Scipion.
    DiIorio MC; Kulczyk AW
    J Vis Exp; 2022 Jan; (179):. PubMed ID: 35104261
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Progressive Stochastic Reconstruction Technique (PSRT) for cryo electron tomography.
    Turoňová B; Marsalek L; Davidovič T; Slusallek P
    J Struct Biol; 2015 Mar; 189(3):195-206. PubMed ID: 25659894
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation.
    Lü Y; Zeng X; Tian X; Shi X; Wang H; Zheng X; Liu X; Zhao X; Gao X; Xu M
    BMC Bioinformatics; 2020 Sep; 21(Suppl 13):391. PubMed ID: 32938398
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Visualizing flexibility at molecular resolution: analysis of heterogeneity in single-particle electron microscopy reconstructions.
    Leschziner AE; Nogales E
    Annu Rev Biophys Biomol Struct; 2007; 36():43-62. PubMed ID: 17201674
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SubspaceEM: A fast maximum-a-posteriori algorithm for cryo-EM single particle reconstruction.
    Dvornek NC; Sigworth FJ; Tagare HD
    J Struct Biol; 2015 May; 190(2):200-14. PubMed ID: 25839831
    [TBL] [Abstract][Full Text] [Related]  

  • 14. IPET and FETR: experimental approach for studying molecular structure dynamics by cryo-electron tomography of a single-molecule structure.
    Zhang L; Ren G
    PLoS One; 2012; 7(1):e30249. PubMed ID: 22291925
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A robust approach to ab initio cryo-electron microscopy initial volume determination.
    Gomez-Blanco J; Kaur S; Ortega J; Vargas J
    J Struct Biol; 2019 Dec; 208(3):107397. PubMed ID: 31568828
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Single-Particle Refinement and Variability Analysis in EMAN2.1.
    Ludtke SJ
    Methods Enzymol; 2016; 579():159-89. PubMed ID: 27572727
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Cryo-EM density maps adjustment for subtraction, consensus and sharpening.
    Fernández-Giménez E; Martínez M; Sánchez-García R; Marabini R; Ramírez-Aportela E; Conesa P; Carazo JM; Sorzano COS
    J Struct Biol; 2021 Dec; 213(4):107780. PubMed ID: 34469787
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques.
    Vargas J; Abrishami V; Marabini R; de la Rosa-Trevín JM; Zaldivar A; Carazo JM; Sorzano COS
    J Struct Biol; 2013 Sep; 183(3):342-353. PubMed ID: 23933392
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Using RELION software within the Scipion framework.
    Sharov G; Morado DR; Carroni M; de la Rosa-Trevín JM
    Acta Crystallogr D Struct Biol; 2021 Apr; 77(Pt 4):403-410. PubMed ID: 33825701
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Autofocused 3D classification of cryoelectron subtomograms.
    Chen Y; Pfeffer S; Fernández JJ; Sorzano CO; Förster F
    Structure; 2014 Oct; 22(10):1528-37. PubMed ID: 25242455
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.