151 related articles for article (PubMed ID: 25637972)
1. Structural fluctuation of proteins induced by thermodynamic perturbation.
Hirata F; Akasaka K
J Chem Phys; 2015 Jan; 142(4):044110. PubMed ID: 25637972
[TBL] [Abstract][Full Text] [Related]
2. Structural fluctuation of protein in water around its native state: a new statistical mechanics formulation.
Kim B; Hirata F
J Chem Phys; 2013 Feb; 138(5):054108. PubMed ID: 23406099
[TBL] [Abstract][Full Text] [Related]
3. Structural Fluctuation, Relaxation, and Folding of Protein: An Approach Based on the Combined Generalized Langevin and RISM/3D-RISM Theories.
Hirata F
Molecules; 2023 Oct; 28(21):. PubMed ID: 37959769
[TBL] [Abstract][Full Text] [Related]
4. Theoretical study of the partial molar volume change associated with the pressure-induced structural transition of ubiquitin.
Imai T; Ohyama S; Kovalenko A; Hirata F
Protein Sci; 2007 Sep; 16(9):1927-33. PubMed ID: 17660257
[TBL] [Abstract][Full Text] [Related]
5. Partial molar volume of proteins studied by the three-dimensional reference interaction site model theory.
Imai T; Kovalenko A; Hirata F
J Phys Chem B; 2005 Apr; 109(14):6658-65. PubMed ID: 16851748
[TBL] [Abstract][Full Text] [Related]
6. A computational method to simulate global conformational changes of proteins induced by cosolvent.
Tanimoto S; Tamura K; Hayashi S; Yoshida N; Nakano H
J Comput Chem; 2021 Mar; 42(8):552-563. PubMed ID: 33433010
[TBL] [Abstract][Full Text] [Related]
7. Theoretical aspects of pressure and solute denaturation of proteins: A Kirkwood-buff-theory approach.
Ben-Naim A
J Chem Phys; 2012 Dec; 137(23):235102. PubMed ID: 23267503
[TBL] [Abstract][Full Text] [Related]
8. Perspective: Structural fluctuation of protein and Anfinsen's thermodynamic hypothesis.
Hirata F; Sugita M; Yoshida M; Akasaka K
J Chem Phys; 2018 Jan; 148(2):020901. PubMed ID: 29331129
[TBL] [Abstract][Full Text] [Related]
9. Statistical mechanics of protein folding, unfolding and fluctuation.
Gło N
Adv Biophys; 1976; ():65-113. PubMed ID: 1015397
[TBL] [Abstract][Full Text] [Related]
10. Realization of the structural fluctuation of biomolecules in solution: Generalized Langevin mode analysis.
Sugita M; Hirata F
J Comput Chem; 2023 Apr; 44(10):1031-1039. PubMed ID: 36594509
[TBL] [Abstract][Full Text] [Related]
11. Statistical thermodynamics of residue fluctuations in native proteins.
Yogurtcu ON; Gur M; Erman B
J Chem Phys; 2009 Mar; 130(9):095103. PubMed ID: 19275429
[TBL] [Abstract][Full Text] [Related]
12. Simulated pressure denaturation thermodynamics of ubiquitin.
Ploetz EA; Smith PE
Biophys Chem; 2017 Dec; 231():135-145. PubMed ID: 28576277
[TBL] [Abstract][Full Text] [Related]
13. A theoretical analysis on characteristics of protein structures induced by cold denaturation.
Oshima H; Yoshidome T; Amano K; Kinoshita M
J Chem Phys; 2009 Nov; 131(20):205102. PubMed ID: 19947708
[TBL] [Abstract][Full Text] [Related]
14. Theoretical analysis of the domain-swapped dimerization of cytochrome c: An MD and 3D-RISM approach.
Yoshida N; Higashi M; Motoki H; Hirota S
J Chem Phys; 2018 Jan; 148(2):025102. PubMed ID: 29331115
[TBL] [Abstract][Full Text] [Related]
15. Comparison between denaturant- and temperature-induced unfolding pathways of protein: a lattice Monte Carlo simulation.
Choi HS; Huh J; Jo WH
Biomacromolecules; 2004; 5(6):2289-96. PubMed ID: 15530044
[TBL] [Abstract][Full Text] [Related]
16. An MM/3D-RISM approach for ligand binding affinities.
Genheden S; Luchko T; Gusarov S; Kovalenko A; Ryde U
J Phys Chem B; 2010 Jul; 114(25):8505-16. PubMed ID: 20524650
[TBL] [Abstract][Full Text] [Related]
17. Theoretical study of the cosolvent effect on the partial molar volume change of staphylococcal nuclease associated with pressure denaturation.
Yamazaki T; Imai T; Hirata F; Kovalenko A
J Phys Chem B; 2007 Feb; 111(5):1206-12. PubMed ID: 17266276
[TBL] [Abstract][Full Text] [Related]
18. The properties of bio-energy transport and influence of structure nonuniformity and temperature of systems on energy transport along polypeptide chains.
Pang XF
Prog Biophys Mol Biol; 2012 Jan; 108(1-2):1-46. PubMed ID: 21951575
[TBL] [Abstract][Full Text] [Related]
19. Water Turns the "Non-biological" Fluctuation of Protein into "Biological" One.
Hirata F
Subcell Biochem; 2015; 72():129-50. PubMed ID: 26174380
[TBL] [Abstract][Full Text] [Related]
20. A molecular theory of the structural dynamics of protein induced by a perturbation.
Hirata F
J Chem Phys; 2016 Dec; 145(23):234106. PubMed ID: 28010110
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]