These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

131 related articles for article (PubMed ID: 25658131)

  • 1. Mapping allostery through computational glycine scanning and correlation analysis of residue-residue contacts.
    Johnson QR; Lindsay RJ; Nellas RB; Fernandez EJ; Shen T
    Biochemistry; 2015 Feb; 54(7):1534-41. PubMed ID: 25658131
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The Promiscuity of Allosteric Regulation of Nuclear Receptors by Retinoid X Receptor.
    Clark AK; Wilder JH; Grayson AW; Johnson QR; Lindsay RJ; Nellas RB; Fernandez EJ; Shen T
    J Phys Chem B; 2016 Aug; 120(33):8338-45. PubMed ID: 27110634
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery.
    Kalescky R; Zhou H; Liu J; Tao P
    PLoS Comput Biol; 2016 Apr; 12(4):e1004893. PubMed ID: 27115535
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computer Simulations of the Retinoid X Receptor: Conformational Dynamics and Allosteric Networks.
    van der Vaart A; Lorkowski A; Ma N; Gray GM
    Curr Top Med Chem; 2017; 17(6):731-741. PubMed ID: 27320334
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dynamical network of residue-residue contacts reveals coupled allosteric effects in recognition, catalysis, and mutation.
    Doshi U; Holliday MJ; Eisenmesser EZ; Hamelberg D
    Proc Natl Acad Sci U S A; 2016 Apr; 113(17):4735-40. PubMed ID: 27071107
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein-protein interaction domains and the heterodimerization of thyroid hormone receptor variant alpha2 with retinoid X receptors.
    Wu Y; Yang YZ; Koenig RJ
    Mol Endocrinol; 1998 Oct; 12(10):1542-50. PubMed ID: 9773977
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Helix 12 dynamics and thyroid hormone receptor activity: experimental and molecular dynamics studies of Ile280 mutants.
    Souza PC; Barra GB; Velasco LF; Ribeiro IC; Simeoni LA; Togashi M; Webb P; Neves FA; Skaf MS; Martínez L; Polikarpov I
    J Mol Biol; 2011 Oct; 412(5):882-93. PubMed ID: 21530542
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Allosteric pathway identification through network analysis: from molecular dynamics simulations to interactive 2D and 3D graphs.
    Allain A; Chauvot de Beauchêne I; Langenfeld F; Guarracino Y; Laine E; Tchertanov L
    Faraday Discuss; 2014; 169():303-21. PubMed ID: 25340971
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Pituitary specific retinoid-X receptor ligand interactions with thyroid hormone receptor signaling revealed by high throughput reporter and endogenous gene responses.
    Mengeling BJ; Furlow JD
    Toxicol In Vitro; 2015 Oct; 29(7):1609-18. PubMed ID: 26096596
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The retinoid X receptor binding to the thyroid hormone receptor: relationship with cofactor binding and transcriptional activity.
    Tagami T; Yamamoto H; Moriyama K; Sawai K; Usui T; Shimatsu A; Naruse M
    J Mol Endocrinol; 2009 May; 42(5):415-28. PubMed ID: 19211732
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Thyroid hormone receptor monomer, homodimer, and heterodimer (with retinoid-X receptor) contact different nucleotide sequences in thyroid hormone response elements.
    Ikeda M; Rhee M; Chin WW
    Endocrinology; 1994 Oct; 135(4):1628-38. PubMed ID: 7925126
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Only subtle protein conformational adaptations are required for ligand binding to thyroid hormone receptors: simulations using a novel multipoint steered molecular dynamics approach.
    Martínez L; Polikarpov I; Skaf MS
    J Phys Chem B; 2008 Aug; 112(34):10741-51. PubMed ID: 18681473
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identifying key residues for protein allostery through rigid residue scan.
    Kalescky R; Liu J; Tao P
    J Phys Chem A; 2015 Mar; 119(9):1689-700. PubMed ID: 25437403
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Retinoid x receptor heterodimers in the metabolic syndrome.
    Shulman AI; Mangelsdorf DJ
    N Engl J Med; 2005 Aug; 353(6):604-15. PubMed ID: 16093469
    [No Abstract]   [Full Text] [Related]  

  • 15. The IkappaBalpha gene is a peroxisome proliferator-activated receptor cardiac target gene.
    Buroker NE; Barboza J; Huang JY
    FEBS J; 2009 Jun; 276(12):3247-55. PubMed ID: 19438714
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Probing Protein Allostery as a Residue-Specific Concept via Residue Response Maps.
    Hayatshahi HS; Ahuactzin E; Tao P; Wang S; Liu J
    J Chem Inf Model; 2019 Nov; 59(11):4691-4705. PubMed ID: 31589429
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Molecular determinants of the interactions between LXR/RXR heterodimers and TRAP220.
    Son YL; Lee YC
    Biochem Biophys Res Commun; 2009 Jul; 384(3):389-93. PubMed ID: 19410560
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular modeling revealed that ligand dissociation from thyroid hormone receptors is affected by receptor heterodimerization.
    Zhuang S; Bao L; Linhananta A; Liu W
    J Mol Graph Model; 2013 Jul; 44():155-60. PubMed ID: 23831995
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Dancing through Life: Molecular Dynamics Simulations and Network-Centric Modeling of Allosteric Mechanisms in Hsp70 and Hsp110 Chaperone Proteins.
    Stetz G; Verkhivker GM
    PLoS One; 2015; 10(11):e0143752. PubMed ID: 26619280
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantitative analysis of DNA binding affinity and dimerization properties of wild-type and mutant thyroid hormone receptor beta1.
    Takeda T; Nagasawa T; Miyamoto T; Minemura K; Hashizume K; Degroot LJ
    Thyroid; 2000 Jan; 10(1):11-8. PubMed ID: 10691308
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.