135 related articles for article (PubMed ID: 25697661)
1. PRIMEGENSw3: a web-based tool for high-throughput primer and probe design.
Kushwaha G; Srivastava GP; Xu D
Methods Mol Biol; 2015; 1275():181-99. PubMed ID: 25697661
[TBL] [Abstract][Full Text] [Related]
2. Genome-scale probe and primer design with PRIMEGENS.
Srivastava GP; Xu D
Methods Mol Biol; 2007; 402():159-76. PubMed ID: 17951795
[TBL] [Abstract][Full Text] [Related]
3. PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis.
Xu D; Li G; Wu L; Zhou J; Xu Y
Bioinformatics; 2002 Nov; 18(11):1432-7. PubMed ID: 12424113
[TBL] [Abstract][Full Text] [Related]
4. QuantPrime--a flexible tool for reliable high-throughput primer design for quantitative PCR.
Arvidsson S; Kwasniewski M; Riaño-Pachón DM; Mueller-Roeber B
BMC Bioinformatics; 2008 Nov; 9():465. PubMed ID: 18976492
[TBL] [Abstract][Full Text] [Related]
5. Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction.
Ye J; Coulouris G; Zaretskaya I; Cutcutache I; Rozen S; Madden TL
BMC Bioinformatics; 2012 Jun; 13():134. PubMed ID: 22708584
[TBL] [Abstract][Full Text] [Related]
6. MSP-HTPrimer: a high-throughput primer design tool to improve assay design for DNA methylation analysis in epigenetics.
Pandey RV; Pulverer W; Kallmeyer R; Beikircher G; Pabinger S; Kriegner A; Weinhäusel A
Clin Epigenetics; 2016; 8():101. PubMed ID: 27688817
[TBL] [Abstract][Full Text] [Related]
7. MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research.
Pandey RV; Pulverer W; Kallmeyer R; Beikircher G; Pabinger S; Kriegner A; Weinhäusel A
Clin Epigenetics; 2016; 8():26. PubMed ID: 26949424
[TBL] [Abstract][Full Text] [Related]
8. The BiSearch web server.
Arányi T; Váradi A; Simon I; Tusnády GE
BMC Bioinformatics; 2006 Oct; 7():431. PubMed ID: 17022803
[TBL] [Abstract][Full Text] [Related]
9. PRISE2: software for designing sequence-selective PCR primers and probes.
Huang YT; Yang JI; Chrobak M; Borneman J
BMC Bioinformatics; 2014 Sep; 15(1):317. PubMed ID: 25252611
[TBL] [Abstract][Full Text] [Related]
10. PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.
Srivastava GP; Guo J; Shi H; Xu D
Bioinformatics; 2008 Sep; 24(17):1837-42. PubMed ID: 18579568
[TBL] [Abstract][Full Text] [Related]
11. FastPCR: An in silico tool for fast primer and probe design and advanced sequence analysis.
Kalendar R; Khassenov B; Ramankulov Y; Samuilova O; Ivanov KI
Genomics; 2017 Jul; 109(3-4):312-319. PubMed ID: 28502701
[TBL] [Abstract][Full Text] [Related]
12. Integrated minimum-set primers and unique probe design algorithms for differential detection on symptom-related pathogens.
Huang YC; Chang CF; Chan CH; Yeh TJ; Chang YC; Chen CC; Kao CY
Bioinformatics; 2005 Dec; 21(24):4330-7. PubMed ID: 16249263
[TBL] [Abstract][Full Text] [Related]
13. PrimerStation: a highly specific multiplex genomic PCR primer design server for the human genome.
Yamada T; Soma H; Morishita S
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W665-9. PubMed ID: 16845094
[TBL] [Abstract][Full Text] [Related]
14. MultiPLX: automatic grouping and evaluation of PCR primers.
Kaplinski L; Remm M
Methods Mol Biol; 2007; 402():287-304. PubMed ID: 17951801
[TBL] [Abstract][Full Text] [Related]
15. In silico PCR primer designing and validation.
Kumar A; Chordia N
Methods Mol Biol; 2015; 1275():143-51. PubMed ID: 25697657
[TBL] [Abstract][Full Text] [Related]
16. methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.
Pattyn F; Hoebeeck J; Robbrecht P; Michels E; De Paepe A; Bottu G; Coornaert D; Herzog R; Speleman F; Vandesompele J
BMC Bioinformatics; 2006 Nov; 7():496. PubMed ID: 17094804
[TBL] [Abstract][Full Text] [Related]
17. AutoDimer: a screening tool for primer-dimer and hairpin structures.
Vallone PM; Butler JM
Biotechniques; 2004 Aug; 37(2):226-31. PubMed ID: 15335214
[TBL] [Abstract][Full Text] [Related]
18. URPD: a specific product primer design tool.
Chuang LY; Cheng YH; Yang CH
BMC Res Notes; 2012 Jun; 5():306. PubMed ID: 22713312
[TBL] [Abstract][Full Text] [Related]
19. MFEprimer-2.0: a fast thermodynamics-based program for checking PCR primer specificity.
Qu W; Zhou Y; Zhang Y; Lu Y; Wang X; Zhao D; Yang Y; Zhang C
Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W205-8. PubMed ID: 22689644
[TBL] [Abstract][Full Text] [Related]
20. RTPrimerDB: the portal for real-time PCR primers and probes.
Lefever S; Vandesompele J; Speleman F; Pattyn F
Nucleic Acids Res; 2009 Jan; 37(Database issue):D942-5. PubMed ID: 18948285
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]