BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

156 related articles for article (PubMed ID: 25697819)

  • 1. The GPMDB REST interface.
    Fenyö D; Beavis RC
    Bioinformatics; 2015 Jun; 31(12):2056-8. PubMed ID: 25697819
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BioDownloader: bioinformatics downloads and updates in a few clicks.
    Shapovalov MV; Canutescu AA; Dunbrack RL
    Bioinformatics; 2007 Jun; 23(11):1437-9. PubMed ID: 17483505
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Proteomics FASTA archive and reference resource.
    Falkner JA; Hill JA; Andrews PC
    Proteomics; 2008 May; 8(9):1756-7. PubMed ID: 18442177
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Metrics for the Human Proteome Project 2016: Progress on Identifying and Characterizing the Human Proteome, Including Post-Translational Modifications.
    Omenn GS; Lane L; Lundberg EK; Beavis RC; Overall CM; Deutsch EW
    J Proteome Res; 2016 Nov; 15(11):3951-3960. PubMed ID: 27487407
    [TBL] [Abstract][Full Text] [Related]  

  • 5. BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID.
    Winter AG; Wildenhain J; Tyers M
    Bioinformatics; 2011 Apr; 27(7):1043-4. PubMed ID: 21300700
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Ensembl REST API: Ensembl Data for Any Language.
    Yates A; Beal K; Keenan S; McLaren W; Pignatelli M; Ritchie GR; Ruffier M; Taylor K; Vullo A; Flicek P
    Bioinformatics; 2015 Jan; 31(1):143-5. PubMed ID: 25236461
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats.
    Falkner JA; Falkner JW; Andrews PC
    Bioinformatics; 2007 Jan; 23(2):262-3. PubMed ID: 17121776
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interoperability with Moby 1.0--it's better than sharing your toothbrush!
    ; Wilkinson MD; Senger M; Kawas E; Bruskiewich R; Gouzy J; Noirot C; Bardou P; Ng A; Haase D; Saiz Ede A; Wang D; Gibbons F; Gordon PM; Sensen CW; Carrasco JM; Fernández JM; Shen L; Links M; Ng M; Opushneva N; Neerincx PB; Leunissen JA; Ernst R; Twigger S; Usadel B; Good B; Wong Y; Stein L; Crosby W; Karlsson J; Royo R; Párraga I; Ramírez S; Gelpi JL; Trelles O; Pisano DG; Jimenez N; Kerhornou A; Rosset R; Zamacola L; Tarraga J; Huerta-Cepas J; Carazo JM; Dopazo J; Guigo R; Navarro A; Orozco M; Valencia A; Claros MG; Pérez AJ; Aldana J; Rojano M; Fernandez-Santa Cruz R; Navas I; Schiltz G; Farmer A; Gessler D; Schoof H; Groscurth A
    Brief Bioinform; 2008 May; 9(3):220-31. PubMed ID: 18238804
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Designing and executing scientific workflows with a programmable integrator.
    Chagoyen M; Kurul ME; De-Alarcón PA; Carazo JM; Gupta A
    Bioinformatics; 2004 Sep; 20(13):2092-100. PubMed ID: 15059834
    [TBL] [Abstract][Full Text] [Related]  

  • 10. GlycoRDF: an ontology to standardize glycomics data in RDF.
    Ranzinger R; Aoki-Kinoshita KF; Campbell MP; Kawano S; Lütteke T; Okuda S; Shinmachi D; Shikanai T; Sawaki H; Toukach P; Matsubara M; Yamada I; Narimatsu H
    Bioinformatics; 2015 Mar; 31(6):919-25. PubMed ID: 25388145
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Parallel tandem: a program for parallel processing of tandem mass spectra using PVM or MPI and X!Tandem.
    Duncan DT; Craig R; Link AJ
    J Proteome Res; 2005; 4(5):1842-7. PubMed ID: 16212440
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Data mining in protein interactomics. Six computational research challenges and opportunities.
    Chen JY; Sivachenko AY
    IEEE Eng Med Biol Mag; 2005; 24(3):95-102. PubMed ID: 15971847
    [No Abstract]   [Full Text] [Related]  

  • 13. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The wildcat toolbox: a set of perl script utilities for use in peptide mass spectral database searching and proteomics experiments.
    Haynes PA; Miller S; Radabaugh T; Galligan M; Breci L; Rohrbough J; Hickman F; Merchant N
    J Biomol Tech; 2006 Apr; 17(2):97-102. PubMed ID: 16741236
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Integration of gel-based proteome data with pProRep.
    Laukens K; Matthiesen R; Lemière F; Esmans E; Onckelen HV; Jensen ON; Witters E
    Bioinformatics; 2006 Nov; 22(22):2838-40. PubMed ID: 17032679
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Data mining in bioinformatics using Weka.
    Frank E; Hall M; Trigg L; Holmes G; Witten IH
    Bioinformatics; 2004 Oct; 20(15):2479-81. PubMed ID: 15073010
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A platform to standardize, store, and visualize proteomics experimental data.
    Zheng G; Li H; Wang C; Sheng Q; Fan H; Yang S; Liu B; Dai J; Zeng R; Xie L
    Acta Biochim Biophys Sin (Shanghai); 2009 Apr; 41(4):273-9. PubMed ID: 19352541
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The jPOST environment: an integrated proteomics data repository and database.
    Moriya Y; Kawano S; Okuda S; Watanabe Y; Matsumoto M; Takami T; Kobayashi D; Yamanouchi Y; Araki N; Yoshizawa AC; Tabata T; Iwasaki M; Sugiyama N; Tanaka S; Goto S; Ishihama Y
    Nucleic Acids Res; 2019 Jan; 47(D1):D1218-D1224. PubMed ID: 30295851
    [TBL] [Abstract][Full Text] [Related]  

  • 19. iProX: an integrated proteome resource.
    Ma J; Chen T; Wu S; Yang C; Bai M; Shu K; Li K; Zhang G; Jin Z; He F; Hermjakob H; Zhu Y
    Nucleic Acids Res; 2019 Jan; 47(D1):D1211-D1217. PubMed ID: 30252093
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A System for Information Management in BioMedical Studies--SIMBioMS.
    Krestyaninova M; Zarins A; Viksna J; Kurbatova N; Rucevskis P; Neogi SG; Gostev M; Perheentupa T; Knuuttila J; Barrett A; Lappalainen I; Rung J; Podnieks K; Sarkans U; McCarthy MI; Brazma A
    Bioinformatics; 2009 Oct; 25(20):2768-9. PubMed ID: 19633095
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.