These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

276 related articles for article (PubMed ID: 25700475)

  • 1. A Novel Approach to Multiple Sequence Alignment Using Multiobjective Evolutionary Algorithm Based on Decomposition.
    Zhu H; He Z; Jia Y
    IEEE J Biomed Health Inform; 2016 Mar; 20(2):717-27. PubMed ID: 25700475
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Optimizing multiple sequence alignments using a genetic algorithm based on three objectives: structural information, non-gaps percentage and totally conserved columns.
    Ortuño FM; Valenzuela O; Rojas F; Pomares H; Florido JP; Urquiza JM; Rojas I
    Bioinformatics; 2013 Sep; 29(17):2112-21. PubMed ID: 23793754
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Assessing the efficiency of multiple sequence alignment programs.
    Pais FS; Ruy PC; Oliveira G; Coimbra RS
    Algorithms Mol Biol; 2014 Mar; 9(1):4. PubMed ID: 24602402
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MSAIndelFR: a scheme for multiple protein sequence alignment using information on indel flanking regions.
    Al-Shatnawi M; Ahmad MO; Swamy MN
    BMC Bioinformatics; 2015 Nov; 16():393. PubMed ID: 26597571
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiple sequence alignment using multi-objective based bacterial foraging optimization algorithm.
    Rani RR; Ramyachitra D
    Biosystems; 2016 Dec; 150():177-189. PubMed ID: 27784624
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Vertical decomposition with Genetic Algorithm for Multiple Sequence Alignment.
    Naznin F; Sarker R; Essam D
    BMC Bioinformatics; 2011 Aug; 12():353. PubMed ID: 21867510
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Multiple protein sequence alignment with MSAProbs.
    Liu Y; Schmidt B
    Methods Mol Biol; 2014; 1079():211-8. PubMed ID: 24170405
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Resolving the multiple sequence alignment problem using biogeography-based optimization with multiple populations.
    Zemali el-A; Boukra A
    J Bioinform Comput Biol; 2015 Aug; 13(4):1550016. PubMed ID: 26055803
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A Parallel Multiobjective Metaheuristic for Multiple Sequence Alignment.
    Rubio-Largo Á; Castelli M; Vanneschi L; Vega-Rodríguez MA
    J Comput Biol; 2018 Sep; 25(9):1009-1022. PubMed ID: 29671616
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MSAProbs: multiple sequence alignment based on pair hidden Markov models and partition function posterior probabilities.
    Liu Y; Schmidt B; Maskell DL
    Bioinformatics; 2010 Aug; 26(16):1958-64. PubMed ID: 20576627
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An approach for COFFEE objective function to global DNA multiple sequence alignment.
    Amorim AR; Neves LA; Valêncio CR; Roberto GF; Zafalon GFD
    Comput Biol Chem; 2018 Aug; 75():39-44. PubMed ID: 29738913
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Multiple Sequence Alignment with Hidden Markov Models Learned by Random Drift Particle Swarm Optimization.
    Sun J; Palade V; Wu X; Fang W
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(1):243-57. PubMed ID: 26355522
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Mind the gaps: evidence of bias in estimates of multiple sequence alignments.
    Golubchik T; Wise MJ; Easteal S; Jermiin LS
    Mol Biol Evol; 2007 Nov; 24(11):2433-42. PubMed ID: 17709332
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A simple genetic algorithm for multiple sequence alignment.
    Gondro C; Kinghorn BP
    Genet Mol Res; 2007 Oct; 6(4):964-82. PubMed ID: 18058716
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost.
    Yamada S; Gotoh O; Yamana H
    BMC Bioinformatics; 2006 Dec; 7():524. PubMed ID: 17137519
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ProgSIO-MSA: Progressive-based single iterative optimization framework for multiple sequence alignment using an effective scoring system.
    Bankapur S; Patil N
    J Bioinform Comput Biol; 2020 Apr; 18(2):2050005. PubMed ID: 32372711
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment.
    Subramanian AR; Weyer-Menkhoff J; Kaufmann M; Morgenstern B
    BMC Bioinformatics; 2005 Mar; 6():66. PubMed ID: 15784139
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A knowledge-based multiple-sequence alignment algorithm.
    Nguyen KD; Pan Y
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(4):884-96. PubMed ID: 24334383
    [TBL] [Abstract][Full Text] [Related]  

  • 19. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
    Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
    BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An adaptive and iterative algorithm for refining multiple sequence alignment.
    Wang Y; Li KB
    Comput Biol Chem; 2004 Apr; 28(2):141-8. PubMed ID: 15130542
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.