BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

267 related articles for article (PubMed ID: 25747252)

  • 1. Genome-wide analysis reveals diverged patterns of codon bias, gene expression, and rates of sequence evolution in picea gene families.
    De La Torre AR; Lin YC; Van de Peer Y; Ingvarsson PK
    Genome Biol Evol; 2015 Mar; 7(4):1002-15. PubMed ID: 25747252
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Expression Divergence Is Correlated with Sequence Evolution but Not Positive Selection in Conifers.
    Hodgins KA; Yeaman S; Nurkowski KA; Rieseberg LH; Aitken SN
    Mol Biol Evol; 2016 Jun; 33(6):1502-16. PubMed ID: 26873578
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
    Ralph SG; Chun HJ; Kolosova N; Cooper D; Oddy C; Ritland CE; Kirkpatrick R; Moore R; Barber S; Holt RA; Jones SJ; Marra MA; Douglas CJ; Ritland K; Bohlmann J
    BMC Genomics; 2008 Oct; 9():484. PubMed ID: 18854048
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Spruce giga-genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes.
    Gagalova KK; Warren RL; Coombe L; Wong J; Nip KM; Yuen MMS; Whitehill JGA; Celedon JM; Ritland C; Taylor GA; Cheng D; Plettner P; Hammond SA; Mohamadi H; Zhao Y; Moore RA; Mungall AJ; Boyle B; Laroche J; Cottrell J; Mackay JJ; Lamothe M; Gérardi S; Isabel N; Pavy N; Jones SJM; Bohlmann J; Bousquet J; Birol I
    Plant J; 2022 Sep; 111(5):1469-1485. PubMed ID: 35789009
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers.
    Pavy N; Pelgas B; Laroche J; Rigault P; Isabel N; Bousquet J
    BMC Biol; 2012 Oct; 10():84. PubMed ID: 23102090
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data Alone.
    Gilchrist MA; Chen WC; Shah P; Landerer CL; Zaretzki R
    Genome Biol Evol; 2015 May; 7(6):1559-79. PubMed ID: 25977456
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The monosaccharide transporter gene family in Arabidopsis and rice: a history of duplications, adaptive evolution, and functional divergence.
    Johnson DA; Thomas MA
    Mol Biol Evol; 2007 Nov; 24(11):2412-23. PubMed ID: 17827171
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Quantitative evolution of transposable and satellite DNA sequences in Picea species.
    Sarri V; Ceccarelli M; Cionini PG
    Genome; 2011 May; 54(5):431-5. PubMed ID: 21539442
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Analysis of the WUSCHEL-RELATED HOMEOBOX gene family in the conifer picea abies reveals extensive conservation as well as dynamic patterns.
    Hedman H; Zhu T; von Arnold S; Sohlberg JJ
    BMC Plant Biol; 2013 Jun; 13():89. PubMed ID: 23758772
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms.
    Chen J; Uebbing S; Gyllenstrand N; Lagercrantz U; Lascoux M; Källman T
    BMC Genomics; 2012 Nov; 13():589. PubMed ID: 23122049
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Gene expression and protein length influence codon usage and rates of sequence evolution in Populus tremula.
    Ingvarsson PK
    Mol Biol Evol; 2007 Mar; 24(3):836-44. PubMed ID: 17204548
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Rapid divergence of codon usage patterns within the rice genome.
    Wang HC; Hickey DA
    BMC Evol Biol; 2007 Feb; 7 Suppl 1(Suppl 1):S6. PubMed ID: 17288579
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Extensive divergence in alternative splicing patterns after gene and genome duplication during the evolutionary history of Arabidopsis.
    Zhang PG; Huang SZ; Pin AL; Adams KL
    Mol Biol Evol; 2010 Jul; 27(7):1686-97. PubMed ID: 20185454
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Insights into conifer giga-genomes.
    De La Torre AR; Birol I; Bousquet J; Ingvarsson PK; Jansson S; Jones SJ; Keeling CI; MacKay J; Nilsson O; Ritland K; Street N; Yanchuk A; Zerbe P; Bohlmann J
    Plant Physiol; 2014 Dec; 166(4):1724-32. PubMed ID: 25349325
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expression.
    Raherison E; Rigault P; Caron S; Poulin PL; Boyle B; Verta JP; Giguère I; Bomal C; Bohlmann J; MacKay J
    BMC Genomics; 2012 Aug; 13():434. PubMed ID: 22931377
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The landscape of nucleotide polymorphism among 13,500 genes of the conifer picea glauca, relationships with functions, and comparison with medicago truncatula.
    Pavy N; Deschênes A; Blais S; Lavigne P; Beaulieu J; Isabel N; Mackay J; Bousquet J
    Genome Biol Evol; 2013; 5(10):1910-25. PubMed ID: 24065735
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome.
    Subramanian S; Kumar S
    Genetics; 2004 Sep; 168(1):373-81. PubMed ID: 15454550
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis.
    Guo J; Wu J; Ji Q; Wang C; Luo L; Yuan Y; Wang Y; Wang J
    J Genet Genomics; 2008 Feb; 35(2):105-18. PubMed ID: 18407058
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications.
    Carretero-Paulet L; Fares MA
    Mol Biol Evol; 2012 Nov; 29(11):3541-51. PubMed ID: 22734049
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Extensive and continuous duplication facilitates rapid evolution and diversification of gene families.
    Chang D; Duda TF
    Mol Biol Evol; 2012 Aug; 29(8):2019-29. PubMed ID: 22337864
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.