These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

185 related articles for article (PubMed ID: 25799498)

  • 1. pH dependence of the stress regulator DksA.
    Furman R; Danhart EM; NandyMazumdar M; Yuan C; Foster MP; Artsimovitch I
    PLoS One; 2015; 10(3):e0120746. PubMed ID: 25799498
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Direct interactions between the coiled-coil tip of DksA and the trigger loop of RNA polymerase mediate transcriptional regulation.
    Lennon CW; Ross W; Martin-Tumasz S; Toulokhonov I; Vrentas CE; Rutherford ST; Lee JH; Butcher SE; Gourse RL
    Genes Dev; 2012 Dec; 26(23):2634-46. PubMed ID: 23207918
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DksA regulates RNA polymerase in Escherichia coli through a network of interactions in the secondary channel that includes Sequence Insertion 1.
    Parshin A; Shiver AL; Lee J; Ozerova M; Schneidman-Duhovny D; Gross CA; Borukhov S
    Proc Natl Acad Sci U S A; 2015 Dec; 112(50):E6862-71. PubMed ID: 26604313
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An insertion in the catalytic trigger loop gates the secondary channel of RNA polymerase.
    Furman R; Tsodikov OV; Wolf YI; Artsimovitch I
    J Mol Biol; 2013 Jan; 425(1):82-93. PubMed ID: 23147217
    [TBL] [Abstract][Full Text] [Related]  

  • 5. TraR directly regulates transcription initiation by mimicking the combined effects of the global regulators DksA and ppGpp.
    Gopalkrishnan S; Ross W; Chen AY; Gourse RL
    Proc Natl Acad Sci U S A; 2017 Jul; 114(28):E5539-E5548. PubMed ID: 28652326
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Escherichia coli DksA binds to Free RNA polymerase with higher affinity than to RNA polymerase in an open complex.
    Lennon CW; Gaal T; Ross W; Gourse RL
    J Bacteriol; 2009 Sep; 191(18):5854-8. PubMed ID: 19617357
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ppGpp Binding to a Site at the RNAP-DksA Interface Accounts for Its Dramatic Effects on Transcription Initiation during the Stringent Response.
    Ross W; Sanchez-Vazquez P; Chen AY; Lee JH; Burgos HL; Gourse RL
    Mol Cell; 2016 Jun; 62(6):811-823. PubMed ID: 27237053
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase.
    Rutherford ST; Lemke JJ; Vrentas CE; Gaal T; Ross W; Gourse RL
    J Mol Biol; 2007 Mar; 366(4):1243-57. PubMed ID: 17207814
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA.
    Molodtsov V; Sineva E; Zhang L; Huang X; Cashel M; Ades SE; Murakami KS
    Mol Cell; 2018 Mar; 69(5):828-839.e5. PubMed ID: 29478808
    [TBL] [Abstract][Full Text] [Related]  

  • 10. TraR, a homolog of a RNAP secondary channel interactor, modulates transcription.
    Blankschien MD; Potrykus K; Grace E; Choudhary A; Vinella D; Cashel M; Herman C
    PLoS Genet; 2009 Jan; 5(1):e1000345. PubMed ID: 19148274
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DksA potentiates direct activation of amino acid promoters by ppGpp.
    Paul BJ; Berkmen MB; Gourse RL
    Proc Natl Acad Sci U S A; 2005 May; 102(22):7823-8. PubMed ID: 15899978
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Role of the coiled-coil tip of Escherichia coli DksA in promoter control.
    Lee JH; Lennon CW; Ross W; Gourse RL
    J Mol Biol; 2012 Mar; 416(4):503-17. PubMed ID: 22200485
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Allosteric control of Escherichia coli rRNA promoter complexes by DksA.
    Rutherford ST; Villers CL; Lee JH; Ross W; Gourse RL
    Genes Dev; 2009 Jan; 23(2):236-48. PubMed ID: 19171784
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Role of a Zn-independent DksA in Zn homeostasis and stringent response.
    Blaby-Haas CE; Furman R; Rodionov DA; Artsimovitch I; de Crécy-Lagard V
    Mol Microbiol; 2011 Feb; 79(3):700-15. PubMed ID: 21255113
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DksA and ppGpp Regulate the σ
    Girard ME; Gopalkrishnan S; Grace ED; Halliday JA; Gourse RL; Herman C
    J Bacteriol; 2018 Jan; 200(2):. PubMed ID: 29061665
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DksA2, a zinc-independent structural analog of the transcription factor DksA.
    Furman R; Biswas T; Danhart EM; Foster MP; Tsodikov OV; Artsimovitch I
    FEBS Lett; 2013 Mar; 587(6):614-9. PubMed ID: 23416301
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The dual role of DksA protein in the regulation of Escherichia coli pArgX promoter.
    Łyżeń R; Maitra A; Milewska K; Kochanowska-Łyżeń M; Hernandez VJ; Szalewska-Pałasz A
    Nucleic Acids Res; 2016 Dec; 44(21):10316-10325. PubMed ID: 27915292
    [TBL] [Abstract][Full Text] [Related]  

  • 18. DksA is required for growth phase-dependent regulation, growth rate-dependent control, and stringent control of fis expression in Escherichia coli.
    Mallik P; Paul BJ; Rutherford ST; Gourse RL; Osuna R
    J Bacteriol; 2006 Aug; 188(16):5775-82. PubMed ID: 16885445
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.
    Lamour V; Rutherford ST; Kuznedelov K; Ramagopal UA; Gourse RL; Severinov K; Darst SA
    J Mol Biol; 2008 Nov; 383(2):367-79. PubMed ID: 18760284
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DksA-RNA polymerase interactions support new origin formation and DNA repair in Escherichia coli.
    Myka KK; Küsters K; Washburn R; Gottesman ME
    Mol Microbiol; 2019 May; 111(5):1382-1397. PubMed ID: 30779388
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.