581 related articles for article (PubMed ID: 25800162)
1. PSOVina: The hybrid particle swarm optimization algorithm for protein-ligand docking.
Ng MC; Fong S; Siu SW
J Bioinform Comput Biol; 2015 Jun; 13(3):1541007. PubMed ID: 25800162
[TBL] [Abstract][Full Text] [Related]
2. FWAVina: A novel optimization algorithm for protein-ligand docking based on the fireworks algorithm.
Li J; Song Y; Li F; Zhang H; Liu W
Comput Biol Chem; 2020 Oct; 88():107363. PubMed ID: 32861160
[TBL] [Abstract][Full Text] [Related]
3. Chaos-embedded particle swarm optimization approach for protein-ligand docking and virtual screening.
Tai HK; Jusoh SA; Siu SWI
J Cheminform; 2018 Dec; 10(1):62. PubMed ID: 30552524
[TBL] [Abstract][Full Text] [Related]
4. A Hybrid Cuckoo Search and Differential Evolution Approach to Protein⁻Ligand Docking.
Lin H; Siu SWI
Int J Mol Sci; 2018 Oct; 19(10):. PubMed ID: 30326669
[TBL] [Abstract][Full Text] [Related]
5. Diversity-guided Lamarckian random drift particle swarm optimization for flexible ligand docking.
Li C; Sun J; Palade V
BMC Bioinformatics; 2020 Jul; 21(1):286. PubMed ID: 32631216
[TBL] [Abstract][Full Text] [Related]
6. Parallel multi-swarm cooperative particle swarm optimization for protein-ligand docking and virtual screening.
Li C; Li J; Sun J; Mao L; Palade V; Ahmad B
BMC Bioinformatics; 2022 May; 23(1):201. PubMed ID: 35637537
[TBL] [Abstract][Full Text] [Related]
7. pso@autodock: a fast flexible molecular docking program based on Swarm intelligence.
Namasivayam V; Günther R
Chem Biol Drug Des; 2007 Dec; 70(6):475-84. PubMed ID: 17986206
[TBL] [Abstract][Full Text] [Related]
8. Random drift particle swarm optimisation algorithm for highly flexible protein-ligand docking.
Fu Y; Chen Z; Sun J
J Theor Biol; 2018 Nov; 457():180-189. PubMed ID: 30170044
[TBL] [Abstract][Full Text] [Related]
9. GWOVina: A grey wolf optimization approach to rigid and flexible receptor docking.
Wong KM; Tai HK; Siu SWI
Chem Biol Drug Des; 2021 Jan; 97(1):97-110. PubMed ID: 32679606
[TBL] [Abstract][Full Text] [Related]
10. Comprehensive evaluation of ten docking programs on a diverse set of protein-ligand complexes: the prediction accuracy of sampling power and scoring power.
Wang Z; Sun H; Yao X; Li D; Xu L; Li Y; Tian S; Hou T
Phys Chem Chem Phys; 2016 May; 18(18):12964-75. PubMed ID: 27108770
[TBL] [Abstract][Full Text] [Related]
11. ParaDockS: a framework for molecular docking with population-based metaheuristics.
Meier R; Pippel M; Brandt F; Sippl W; Baldauf C
J Chem Inf Model; 2010 May; 50(5):879-89. PubMed ID: 20415499
[TBL] [Abstract][Full Text] [Related]
12. FIPSDock: a new molecular docking technique driven by fully informed swarm optimization algorithm.
Liu Y; Zhao L; Li W; Zhao D; Song M; Yang Y
J Comput Chem; 2013 Jan; 34(1):67-75. PubMed ID: 22961860
[TBL] [Abstract][Full Text] [Related]
13. MSLDOCK: Multi-Swarm Optimization for Flexible Ligand Docking and Virtual Screening.
Li C; Sun J; Palade V
J Chem Inf Model; 2021 Mar; 61(3):1500-1515. PubMed ID: 33657798
[TBL] [Abstract][Full Text] [Related]
14. FlexAID: Revisiting Docking on Non-Native-Complex Structures.
Gaudreault F; Najmanovich RJ
J Chem Inf Model; 2015 Jul; 55(7):1323-36. PubMed ID: 26076070
[TBL] [Abstract][Full Text] [Related]
15. RDPSOVina: the random drift particle swarm optimization for protein-ligand docking.
Li J; Li C; Sun J; Palade V
J Comput Aided Mol Des; 2022 Jun; 36(6):415-425. PubMed ID: 35532815
[TBL] [Abstract][Full Text] [Related]
16. An Efficient ABC_DE_Based Hybrid Algorithm for Protein-Ligand Docking.
Guan B; Zhang C; Zhao Y
Int J Mol Sci; 2018 Apr; 19(4):. PubMed ID: 29652791
[TBL] [Abstract][Full Text] [Related]
17. An Effective Swarm Intelligence Optimization Algorithm for Flexible Ligand Docking.
Li C; Sun J; Li LW; Wu X; Palade V
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(5):2672-2684. PubMed ID: 34375285
[TBL] [Abstract][Full Text] [Related]
18. SODOCK: swarm optimization for highly flexible protein-ligand docking.
Chen HM; Liu BF; Huang HL; Hwang SF; Ho SY
J Comput Chem; 2007 Jan; 28(2):612-23. PubMed ID: 17186483
[TBL] [Abstract][Full Text] [Related]
19. istar: a web platform for large-scale protein-ligand docking.
Li H; Leung KS; Ballester PJ; Wong MH
PLoS One; 2014; 9(1):e85678. PubMed ID: 24475049
[TBL] [Abstract][Full Text] [Related]
20. The scoring bias in reverse docking and the score normalization strategy to improve success rate of target fishing.
Luo Q; Zhao L; Hu J; Jin H; Liu Z; Zhang L
PLoS One; 2017; 12(2):e0171433. PubMed ID: 28196116
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]