170 related articles for article (PubMed ID: 25825995)
1. Viewing Human DNA Polymerase β Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.
Vyas R; Reed AJ; Tokarsky EJ; Suo Z
J Am Chem Soc; 2015 Apr; 137(15):5225-30. PubMed ID: 25825995
[TBL] [Abstract][Full Text] [Related]
2. Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta.
Reed AJ; Suo Z
J Am Chem Soc; 2017 Jul; 139(28):9684-9690. PubMed ID: 28682600
[TBL] [Abstract][Full Text] [Related]
3. Binary complex crystal structure of DNA polymerase β reveals multiple conformations of the templating 8-oxoguanine lesion.
Batra VK; Shock DD; Beard WA; McKenna CE; Wilson SH
Proc Natl Acad Sci U S A; 2012 Jan; 109(1):113-8. PubMed ID: 22178760
[TBL] [Abstract][Full Text] [Related]
4. Mutagenic conformation of 8-oxo-7,8-dihydro-2'-dGTP in the confines of a DNA polymerase active site.
Batra VK; Beard WA; Hou EW; Pedersen LC; Prasad R; Wilson SH
Nat Struct Mol Biol; 2010 Jul; 17(7):889-90. PubMed ID: 20526335
[TBL] [Abstract][Full Text] [Related]
5. DNA polymerase minor groove interactions modulate mutagenic bypass of a templating 8-oxoguanine lesion.
Freudenthal BD; Beard WA; Wilson SH
Nucleic Acids Res; 2013 Feb; 41(3):1848-58. PubMed ID: 23267011
[TBL] [Abstract][Full Text] [Related]
6. Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Rechkoblit O; Malinina L; Cheng Y; Geacintov NE; Broyde S; Patel DJ
Structure; 2009 May; 17(5):725-36. PubMed ID: 19446528
[TBL] [Abstract][Full Text] [Related]
7. Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.
Jung H; Lee S
Biochem J; 2020 Aug; 477(15):2859-2871. PubMed ID: 32686822
[TBL] [Abstract][Full Text] [Related]
8. Differing conformational pathways before and after chemistry for insertion of dATP versus dCTP opposite 8-oxoG in DNA polymerase beta.
Wang Y; Reddy S; Beard WA; Wilson SH; Schlick T
Biophys J; 2007 May; 92(9):3063-70. PubMed ID: 17293403
[TBL] [Abstract][Full Text] [Related]
9. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Freudenthal BD; Beard WA; Perera L; Shock DD; Kim T; Schlick T; Wilson SH
Nature; 2015 Jan; 517(7536):635-9. PubMed ID: 25409153
[TBL] [Abstract][Full Text] [Related]
10. Capturing a mammalian DNA polymerase extending from an oxidized nucleotide.
Whitaker AM; Smith MR; Schaich MA; Freudenthal BD
Nucleic Acids Res; 2017 Jun; 45(11):6934-6944. PubMed ID: 28449123
[TBL] [Abstract][Full Text] [Related]
11. How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
Wu WJ; Su MI; Wu JL; Kumar S; Lim LH; Wang CW; Nelissen FH; Chen MC; Doreleijers JF; Wijmenga SS; Tsai MD
J Am Chem Soc; 2014 Apr; 136(13):4927-37. PubMed ID: 24617852
[TBL] [Abstract][Full Text] [Related]
12. Structural basis for promutagenicity of 8-halogenated guanine.
Koag MC; Min K; Lee S
J Biol Chem; 2014 Feb; 289(9):6289-98. PubMed ID: 24425881
[TBL] [Abstract][Full Text] [Related]
13. Structure of human DNA polymerase kappa inserting dATP opposite an 8-OxoG DNA lesion.
Vasquez-Del Carpio R; Silverstein TD; Lone S; Swan MK; Choudhury JR; Johnson RE; Prakash S; Prakash L; Aggarwal AK
PLoS One; 2009 Jun; 4(6):e5766. PubMed ID: 19492058
[TBL] [Abstract][Full Text] [Related]
14. Structure of DNA polymerase beta with the mutagenic DNA lesion 8-oxodeoxyguanine reveals structural insights into its coding potential.
Krahn JM; Beard WA; Miller H; Grollman AP; Wilson SH
Structure; 2003 Jan; 11(1):121-7. PubMed ID: 12517346
[TBL] [Abstract][Full Text] [Related]
15. Metal-dependent conformational activation explains highly promutagenic replication across O6-methylguanine by human DNA polymerase β.
Koag MC; Lee S
J Am Chem Soc; 2014 Apr; 136(15):5709-21. PubMed ID: 24694247
[TBL] [Abstract][Full Text] [Related]
16. Kinetic basis for the differing response to an oxidative lesion by a replicative and a lesion bypass DNA polymerase from Sulfolobus solfataricus.
Maxwell BA; Suo Z
Biochemistry; 2012 Apr; 51(16):3485-96. PubMed ID: 22471521
[TBL] [Abstract][Full Text] [Related]
17. Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion.
Rechkoblit O; Malinina L; Cheng Y; Kuryavyi V; Broyde S; Geacintov NE; Patel DJ
PLoS Biol; 2006 Jan; 4(1):e11. PubMed ID: 16379496
[TBL] [Abstract][Full Text] [Related]
18. Distinct energetics and closing pathways for DNA polymerase beta with 8-oxoG template and different incoming nucleotides.
Wang Y; Schlick T
BMC Struct Biol; 2007 Feb; 7():7. PubMed ID: 17313689
[TBL] [Abstract][Full Text] [Related]
19. Mismatch-induced conformational distortions in polymerase beta support an induced-fit mechanism for fidelity.
Arora K; Beard WA; Wilson SH; Schlick T
Biochemistry; 2005 Oct; 44(40):13328-41. PubMed ID: 16201758
[TBL] [Abstract][Full Text] [Related]
20. Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4.
Eoff RL; Irimia A; Angel KC; Egli M; Guengerich FP
J Biol Chem; 2007 Jul; 282(27):19831-43. PubMed ID: 17468100
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
