BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

202 related articles for article (PubMed ID: 25867764)

  • 1. RNA sequencing of sarcomas with simple karyotypes: identification and enrichment of fusion transcripts.
    Hofvander J; Tayebwa J; Nilsson J; Magnusson L; Brosjö O; Larsson O; von Steyern FV; Domanski HA; Mandahl N; Mertens F
    Lab Invest; 2015 Jun; 95(6):603-9. PubMed ID: 25867764
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detection of Novel Tyrosine Kinase Fusion Genes as Potential Therapeutic Targets in Bone and Soft Tissue Sarcomas Using DNA/RNA-based Clinical Sequencing.
    Hasegawa N; Hayashi T; Niizuma H; Kikuta K; Imanishi J; Endo M; Ikeuchi H; Sasa K; Sano K; Hirabayashi K; Takagi T; Ishijima M; Kato S; Kohsaka S; Saito T; Suehara Y
    Clin Orthop Relat Res; 2024 Mar; 482(3):549-563. PubMed ID: 38014853
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines.
    Ha KC; Lalonde E; Li L; Cavallone L; Natrajan R; Lambros MB; Mitsopoulos C; Hakas J; Kozarewa I; Fenwick K; Lord CJ; Ashworth A; Vincent-Salomon A; Basik M; Reis-Filho JS; Majewski J; Foulkes WD
    BMC Med Genomics; 2011 Oct; 4():75. PubMed ID: 22032724
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Novel ZC3H7B-BCOR, MEAF6-PHF1, and EPC1-PHF1 fusions in ossifying fibromyxoid tumors--molecular characterization shows genetic overlap with endometrial stromal sarcoma.
    Antonescu CR; Sung YS; Chen CL; Zhang L; Chen HW; Singer S; Agaram NP; Sboner A; Fletcher CD
    Genes Chromosomes Cancer; 2014 Feb; 53(2):183-93. PubMed ID: 24285434
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Diagnosis of known sarcoma fusions and novel fusion partners by targeted RNA sequencing with identification of a recurrent ACTB-FOSB fusion in pseudomyogenic hemangioendothelioma.
    Zhu G; Benayed R; Ho C; Mullaney K; Sukhadia P; Rios K; Berry R; Rubin BP; Nafa K; Wang L; Klimstra DS; Ladanyi M; Hameed MR
    Mod Pathol; 2019 May; 32(5):609-620. PubMed ID: 30459475
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene fusion detection in formalin-fixed paraffin-embedded benign fibrous histiocytomas using fluorescence in situ hybridization and RNA sequencing.
    Walther C; Hofvander J; Nilsson J; Magnusson L; Domanski HA; Gisselsson D; Tayebwa J; Doyle LA; Fletcher CD; Mertens F
    Lab Invest; 2015 Sep; 95(9):1071-6. PubMed ID: 26121314
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ChildSeq-RNA: A next-generation sequencing-based diagnostic assay to identify known fusion transcripts in childhood sarcomas.
    Qadir MA; Zhan SH; Kwok B; Bruestle J; Drees B; Popescu OE; Sorensen PH
    J Mol Diagn; 2014 May; 16(3):361-70. PubMed ID: 24517889
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Recurrent PRDM10 gene fusions in undifferentiated pleomorphic sarcoma.
    Hofvander J; Tayebwa J; Nilsson J; Magnusson L; Brosjö O; Larsson O; Vult von Steyern F; Mandahl N; Fletcher CD; Mertens F
    Clin Cancer Res; 2015 Feb; 21(4):864-9. PubMed ID: 25516889
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Detecting disease-defining gene fusions in unclassified round cell sarcomas using anchored multiplex PCR/targeted RNA next-generation sequencing-Molecular and clinicopathological characterization of 16 cases.
    Mantilla JG; Ricciotti RW; Chen E; Hoch BL; Liu YJ
    Genes Chromosomes Cancer; 2019 Oct; 58(10):713-722. PubMed ID: 31033080
    [TBL] [Abstract][Full Text] [Related]  

  • 10. InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.
    Okonechnikov K; Imai-Matsushima A; Paul L; Seitz A; Meyer TF; Garcia-Alcalde F
    PLoS One; 2016; 11(12):e0167417. PubMed ID: 27907167
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FUS-NFATC2 or EWSR1-NFATC2 Fusions Are Present in a Large Proportion of Simple Bone Cysts.
    Pižem J; Šekoranja D; Zupan A; Boštjančič E; Matjašič A; Mavčič B; Contreras JA; Gazič B; Martinčič D; Snoj Ž; Limpel Novak KA; Salapura V
    Am J Surg Pathol; 2020 Dec; 44(12):1623-1634. PubMed ID: 32991339
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Development and validation of an RNA sequencing panel for gene fusions in soft tissue sarcoma.
    Hu W; Yuan L; Zhang X; Ni Y; Hong D; Wang Z; Li X; Ling Y; Zhang C; Deng W; Tian M; Ding R; Song C; Li J; Zhang X
    Cancer Sci; 2022 May; 113(5):1843-1854. PubMed ID: 35238118
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Detection of sarcoma fusions by a next-generation sequencing based-ligation-dependent multiplex RT-PCR assay.
    Lanic MD; Le Loarer F; Rainville V; Sater V; Viennot M; Beaussire L; Viailly PJ; Angot E; Hostein I; Jardin F; Ruminy P; Laé M
    Mod Pathol; 2022 May; 35(5):649-663. PubMed ID: 35075283
    [TBL] [Abstract][Full Text] [Related]  

  • 14. deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data.
    McPherson A; Hormozdiari F; Zayed A; Giuliany R; Ha G; Sun MG; Griffith M; Heravi Moussavi A; Senz J; Melnyk N; Pacheco M; Marra MA; Hirst M; Nielsen TO; Sahinalp SC; Huntsman D; Shah SP
    PLoS Comput Biol; 2011 May; 7(5):e1001138. PubMed ID: 21625565
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Pan-sarcoma genomic analysis of KMT2A rearrangements reveals distinct subtypes defined by YAP1-KMT2A-YAP1 and VIM-KMT2A fusions.
    Massoth LR; Hung YP; Nardi V; Nielsen GP; Hasserjian RP; Louissaint A; Fisch AS; Deshpande V; Zukerberg LR; Lennerz JK; Selig M; Glomski K; Patel PJ; Williams KJ; Sokol ES; Alexander BM; Vergilio JA; Ross JS; Pavlick DC; Chebib I; Williams EA
    Mod Pathol; 2020 Nov; 33(11):2307-2317. PubMed ID: 32461620
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Establishing an RNA fusions panel in soft tissue sarcoma with clinical validation.
    Huang X; Li G; Li L; Wang J; Shen J; Chen Y; Yu W; Chen A; Wu T; Ma J; Ling B; He L; Chen X
    Sci Rep; 2023 Mar; 13(1):4403. PubMed ID: 36928336
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genomic and transcriptomic characterisation of undifferentiated pleomorphic sarcoma of bone.
    Ali NM; Niada S; Brini AT; Morris MR; Kurusamy S; Alholle A; Huen D; Antonescu CR; Tirode F; Sumathi V; Latif F
    J Pathol; 2019 Feb; 247(2):166-176. PubMed ID: 30281149
    [TBL] [Abstract][Full Text] [Related]  

  • 18. mRNA Capture Sequencing and RT-qPCR for the Detection of Pathognomonic, Novel, and Secondary Fusion Transcripts in FFPE Tissue: A Sarcoma Showcase.
    Decock A; Creytens D; Lefever S; Van der Meulen J; Anckaert J; De Ganck A; Deleu J; De Wilde B; Fierro C; Kuersten S; Luypaert M; Rottiers I; Schroth GP; Steyaert S; Vanderheyden K; Vanden Eynde E; Verniers K; Verreth J; Van Dorpe J; Vandesompele J
    Int J Mol Sci; 2022 Sep; 23(19):. PubMed ID: 36232302
    [TBL] [Abstract][Full Text] [Related]  

  • 19. FusionQ: a novel approach for gene fusion detection and quantification from paired-end RNA-Seq.
    Liu C; Ma J; Chang CJ; Zhou X
    BMC Bioinformatics; 2013 Jun; 14():193. PubMed ID: 23768108
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Advances in chromosomal translocations and fusion genes in sarcomas and potential therapeutic applications.
    Xiao X; Garbutt CC; Hornicek F; Guo Z; Duan Z
    Cancer Treat Rev; 2018 Feb; 63():61-70. PubMed ID: 29247978
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.