BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

123 related articles for article (PubMed ID: 25872660)

  • 1. Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography.
    Unno M; Ishikawa-Suto K; Kusaka K; Tamada T; Hagiwara Y; Sugishima M; Wada K; Yamada T; Tomoyori K; Hosoya T; Tanaka I; Niimura N; Kuroki R; Inaka K; Ishihara M; Fukuyama K
    J Am Chem Soc; 2015 Apr; 137(16):5452-60. PubMed ID: 25872660
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Induced-fitting and electrostatic potential change of PcyA upon substrate binding demonstrated by the crystal structure of the substrate-free form.
    Hagiwara Y; Sugishima M; Takahashi Y; Fukuyama K
    FEBS Lett; 2006 Jul; 580(16):3823-8. PubMed ID: 16782089
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin.
    Hagiwara Y; Wada K; Irikawa T; Sato H; Unno M; Yamamoto K; Fukuyama K; Sugishima M
    FEBS Lett; 2016 Oct; 590(19):3425-3434. PubMed ID: 27596987
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Neutron crystallography and quantum chemical analysis of bilin reductase PcyA mutants reveal substrate and catalytic residue protonation states.
    Joutsuka T; Nanasawa R; Igarashi K; Horie K; Sugishima M; Hagiwara Y; Wada K; Fukuyama K; Yano N; Mori S; Ostermann A; Kusaka K; Unno M
    J Biol Chem; 2023 Jan; 299(1):102763. PubMed ID: 36463961
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA).
    Hagiwara Y; Sugishima M; Khawn H; Kinoshita H; Inomata K; Shang L; Lagarias JC; Takahashi Y; Fukuyama K
    J Biol Chem; 2010 Jan; 285(2):1000-7. PubMed ID: 19887371
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin.
    Hagiwara Y; Sugishima M; Takahashi Y; Fukuyama K
    Proc Natl Acad Sci U S A; 2006 Jan; 103(1):27-32. PubMed ID: 16380422
    [TBL] [Abstract][Full Text] [Related]  

  • 7. One residue substitution in PcyA leads to unexpected changes in tetrapyrrole substrate binding.
    Wada K; Hagiwara Y; Yutani Y; Fukuyama K
    Biochem Biophys Res Commun; 2010 Nov; 402(2):373-7. PubMed ID: 20946883
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Biliverdin reduction by cyanobacterial phycocyanobilin:ferredoxin oxidoreductase (PcyA) proceeds via linear tetrapyrrole radical intermediates.
    Tu SL; Gunn A; Toney MD; Britt RD; Lagarias JC
    J Am Chem Soc; 2004 Jul; 126(28):8682-93. PubMed ID: 15250720
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Structure of the biliverdin radical intermediate in phycocyanobilin:ferredoxin oxidoreductase identified by high-field EPR and DFT.
    Stoll S; Gunn A; Brynda M; Sughrue W; Kohler AC; Ozarowski A; Fisher AJ; Lagarias JC; Britt RD
    J Am Chem Soc; 2009 Feb; 131(5):1986-95. PubMed ID: 19159240
    [TBL] [Abstract][Full Text] [Related]  

  • 10. QM/MM Investigation for Protonation States in a Bilin Reductase PcyA-Biliverdin IXα Complex.
    Iijima E; Gleeson MP; Unno M; Mori S
    Chemphyschem; 2018 May; ():. PubMed ID: 29732737
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
    Kohler AC; Gae DD; Richley MA; Stoll S; Gunn A; Lim S; Martin SS; Doukov TI; Britt RD; Ames JB; Lagarias JC; Fisher AJ
    Biochemistry; 2010 Jul; 49(29):6206-18. PubMed ID: 20557110
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A conserved histidine-aspartate pair is required for exovinyl reduction of biliverdin by a cyanobacterial phycocyanobilin:ferredoxin oxidoreductase.
    Tu SL; Sughrue W; Britt RD; Lagarias JC
    J Biol Chem; 2006 Feb; 281(6):3127-36. PubMed ID: 16327013
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements.
    Tu SL; Rockwell NC; Lagarias JC; Fisher AJ
    Biochemistry; 2007 Feb; 46(6):1484-94. PubMed ID: 17279614
    [TBL] [Abstract][Full Text] [Related]  

  • 14. His74 conservation in the bilin reductase PcyA family reflects an important role in protein-substrate structure and dynamics.
    Kabasakal BV; Gae DD; Li J; Lagarias JC; Koehl P; Fisher AJ
    Arch Biochem Biophys; 2013 Sep; 537(2):233-42. PubMed ID: 23911721
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evolution and molecular mechanism of four-electron reducing ferredoxin-dependent bilin reductases from oceanic phages.
    Ledermann B; Schwan M; Sommerkamp JA; Hofmann E; Béjà O; Frankenberg-Dinkel N
    FEBS J; 2018 Jan; 285(2):339-356. PubMed ID: 29156487
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Insights into phycoerythrobilin biosynthesis point toward metabolic channeling.
    Dammeyer T; Frankenberg-Dinkel N
    J Biol Chem; 2006 Sep; 281(37):27081-9. PubMed ID: 16857683
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The Existence of an Isolated Hydronium Ion in the Interior of Proteins.
    Ikeda T; Saito K; Hasegawa R; Ishikita H
    Angew Chem Int Ed Engl; 2017 Jul; 56(31):9151-9154. PubMed ID: 28613440
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Elucidating the origins of phycocyanobilin biosynthesis and phycobiliproteins.
    Rockwell NC; Martin SS; Lagarias JC
    Proc Natl Acad Sci U S A; 2023 Apr; 120(17):e2300770120. PubMed ID: 37071675
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Phycocyanobilin:ferredoxin oxidoreductase of Anabaena sp. PCC 7120. Biochemical and spectroscopic.
    Frankenberg N; Lagarias JC
    J Biol Chem; 2003 Mar; 278(11):9219-26. PubMed ID: 12514179
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Biliverdin amides reveal roles for propionate side chains in bilin reductase recognition and in holophytochrome assembly and photoconversion.
    Shang L; Rockwell NC; Martin SS; Lagarias JC
    Biochemistry; 2010 Jul; 49(29):6070-82. PubMed ID: 20565135
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.