These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

184 related articles for article (PubMed ID: 25880203)

  • 21. De novo sequencing of plant genomes using second-generation technologies.
    Imelfort M; Edwards D
    Brief Bioinform; 2009 Nov; 10(6):609-18. PubMed ID: 19933209
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Whole-genome sequencing for comparative genomics and de novo genome assembly.
    Benjak A; Sala C; Hartkoorn RC
    Methods Mol Biol; 2015; 1285():1-16. PubMed ID: 25779307
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS.
    Berkman PJ; Skarshewski A; Lorenc MT; Lai K; Duran C; Ling EY; Stiller J; Smits L; Imelfort M; Manoli S; McKenzie M; Kubaláková M; Šimková H; Batley J; Fleury D; Doležel J; Edwards D
    Plant Biotechnol J; 2011 Sep; 9(7):768-75. PubMed ID: 21356002
    [TBL] [Abstract][Full Text] [Related]  

  • 24. A physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation.
    Kelleher CT; Chiu R; Shin H; Bosdet IE; Krzywinski MI; Fjell CD; Wilkin J; Yin T; DiFazio SP; Ali J; Asano JK; Chan S; Cloutier A; Girn N; Leach S; Lee D; Mathewson CA; Olson T; O'connor K; Prabhu AL; Smailus DE; Stott JM; Tsai M; Wye NH; Yang GS; Zhuang J; Holt RA; Putnam NH; Vrebalov J; Giovannoni JJ; Grimwood J; Schmutz J; Rokhsar D; Jones SJ; Marra MA; Tuskan GA; Bohlmann J; Ellis BE; Ritland K; Douglas CJ; Schein JE
    Plant J; 2007 Jun; 50(6):1063-78. PubMed ID: 17488239
    [TBL] [Abstract][Full Text] [Related]  

  • 25. nQuire: a statistical framework for ploidy estimation using next generation sequencing.
    Weiß CL; Pais M; Cano LM; Kamoun S; Burbano HA
    BMC Bioinformatics; 2018 Apr; 19(1):122. PubMed ID: 29618319
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Alternate-locus aware variant calling in whole genome sequencing.
    Jäger M; Schubach M; Zemojtel T; Reinert K; Church DM; Robinson PN
    Genome Med; 2016 Dec; 8(1):130. PubMed ID: 27964746
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ).
    Mascher M; Muehlbauer GJ; Rokhsar DS; Chapman J; Schmutz J; Barry K; Muñoz-Amatriaín M; Close TJ; Wise RP; Schulman AH; Himmelbach A; Mayer KF; Scholz U; Poland JA; Stein N; Waugh R
    Plant J; 2013 Nov; 76(4):718-27. PubMed ID: 23998490
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Scaffolding low quality genomes using orthologous protein sequences.
    Li YI; Copley RR
    Bioinformatics; 2013 Jan; 29(2):160-5. PubMed ID: 23162087
    [TBL] [Abstract][Full Text] [Related]  

  • 29. OncoSNP-SEQ: a statistical approach for the identification of somatic copy number alterations from next-generation sequencing of cancer genomes.
    Yau C
    Bioinformatics; 2013 Oct; 29(19):2482-4. PubMed ID: 23926227
    [TBL] [Abstract][Full Text] [Related]  

  • 30. GMASS: a novel measure for genome assembly structural similarity.
    Kwon D; Lee J; Kim J
    BMC Bioinformatics; 2019 Mar; 20(1):147. PubMed ID: 30885117
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Rascaf: Improving Genome Assembly with RNA Sequencing Data.
    Song L; Shankar DS; Florea L
    Plant Genome; 2016 Nov; 9(3):. PubMed ID: 27902792
    [TBL] [Abstract][Full Text] [Related]  

  • 32. flopp: Extremely Fast Long-Read Polyploid Haplotype Phasing by Uniform Tree Partitioning.
    Shaw J; Yu YW
    J Comput Biol; 2022 Feb; 29(2):195-211. PubMed ID: 35041529
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Recent Advances in Assembly of Complex Plant Genomes.
    Kong W; Wang Y; Zhang S; Yu J; Zhang X
    Genomics Proteomics Bioinformatics; 2023 Jun; 21(3):427-439. PubMed ID: 37100237
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Building near-complete plant genomes.
    Michael TP; VanBuren R
    Curr Opin Plant Biol; 2020 Apr; 54():26-33. PubMed ID: 31981929
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Facilitated sequence assembly using densely labeled optical DNA barcodes: A combinatorial auction approach.
    Dvirnas A; Pichler C; Stewart CL; Quaderi S; Nyberg LK; Müller V; Kumar Bikkarolla S; Kristiansson E; Sandegren L; Westerlund F; Ambjörnsson T
    PLoS One; 2018; 13(3):e0193900. PubMed ID: 29522539
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Redundans: an assembly pipeline for highly heterozygous genomes.
    Pryszcz LP; Gabaldón T
    Nucleic Acids Res; 2016 Jul; 44(12):e113. PubMed ID: 27131372
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Extensive error in the number of genes inferred from draft genome assemblies.
    Denton JF; Lugo-Martinez J; Tucker AE; Schrider DR; Warren WC; Hahn MW
    PLoS Comput Biol; 2014 Dec; 10(12):e1003998. PubMed ID: 25474019
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey.
    Swaminathan K; Varala K; Hudson ME
    BMC Genomics; 2007 May; 8():132. PubMed ID: 17524145
    [TBL] [Abstract][Full Text] [Related]  

  • 39. How can a high-quality genome assembly help plant breeders?
    Benevenuto J; Ferrão LFV; Amadeu RR; Munoz P
    Gigascience; 2019 Jun; 8(6):. PubMed ID: 31184361
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Genetic anchoring of whole-genome shotgun assemblies.
    Mascher M; Stein N
    Front Genet; 2014; 5():208. PubMed ID: 25071835
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.