228 related articles for article (PubMed ID: 25897112)
1. RBO Aleph: leveraging novel information sources for protein structure prediction.
Mabrouk M; Putz I; Werner T; Schneider M; Neeb M; Bartels P; Brock O
Nucleic Acids Res; 2015 Jul; 43(W1):W343-8. PubMed ID: 25897112
[TBL] [Abstract][Full Text] [Related]
2. Analysis of free modeling predictions by RBO aleph in CASP11.
Mabrouk M; Werner T; Schneider M; Putz I; Brock O
Proteins; 2016 Sep; 84 Suppl 1(Suppl 1):87-104. PubMed ID: 26492194
[TBL] [Abstract][Full Text] [Related]
3. Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model.
Wang S; Sun S; Li Z; Zhang R; Xu J
PLoS Comput Biol; 2017 Jan; 13(1):e1005324. PubMed ID: 28056090
[TBL] [Abstract][Full Text] [Related]
4. An Improved Integration of Template-Based and Template-Free Protein Structure Modeling Methods and its Assessment in CASP11.
Li J; Adhikari B; Cheng J
Protein Pept Lett; 2015; 22(7):586-93. PubMed ID: 25990081
[TBL] [Abstract][Full Text] [Related]
5. Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13.
Hou J; Wu T; Cao R; Cheng J
Proteins; 2019 Dec; 87(12):1165-1178. PubMed ID: 30985027
[TBL] [Abstract][Full Text] [Related]
6. Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks.
Walsh I; BaĆ¹ D; Martin AJ; Mooney C; Vullo A; Pollastri G
BMC Struct Biol; 2009 Jan; 9():5. PubMed ID: 19183478
[TBL] [Abstract][Full Text] [Related]
7. FALCON2: a web server for high-quality prediction of protein tertiary structures.
Kong L; Ju F; Zhang H; Sun S; Bu D
BMC Bioinformatics; 2021 Sep; 22(1):439. PubMed ID: 34525939
[TBL] [Abstract][Full Text] [Related]
8. AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction.
Xu D; Jaroszewski L; Li Z; Godzik A
Bioinformatics; 2015 Jul; 31(13):2098-105. PubMed ID: 25701568
[TBL] [Abstract][Full Text] [Related]
9. CABS-fold: Server for the de novo and consensus-based prediction of protein structure.
Blaszczyk M; Jamroz M; Kmiecik S; Kolinski A
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W406-11. PubMed ID: 23748950
[TBL] [Abstract][Full Text] [Related]
10. GalaxyWEB server for protein structure prediction and refinement.
Ko J; Park H; Heo L; Seok C
Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W294-7. PubMed ID: 22649060
[TBL] [Abstract][Full Text] [Related]
11. Assessing Predicted Contacts for Building Protein Three-Dimensional Models.
Adhikari B; Bhattacharya D; Cao R; Cheng J
Methods Mol Biol; 2017; 1484():115-126. PubMed ID: 27787823
[TBL] [Abstract][Full Text] [Related]
12. The MULTICOM Protein Structure Prediction Server Empowered by Deep Learning and Contact Distance Prediction.
Hou J; Wu T; Guo Z; Quadir F; Cheng J
Methods Mol Biol; 2020; 2165():13-26. PubMed ID: 32621217
[TBL] [Abstract][Full Text] [Related]
13. Template-based and free modeling of I-TASSER and QUARK pipelines using predicted contact maps in CASP12.
Zhang C; Mortuza SM; He B; Wang Y; Zhang Y
Proteins; 2018 Mar; 86 Suppl 1(Suppl 1):136-151. PubMed ID: 29082551
[TBL] [Abstract][Full Text] [Related]
14. FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition.
Wang C; Zhang H; Zheng WM; Xu D; Zhu J; Wang B; Ning K; Sun S; Li SC; Bu D
Bioinformatics; 2016 Feb; 32(3):462-4. PubMed ID: 26454278
[TBL] [Abstract][Full Text] [Related]
15. IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequences.
McGuffin LJ; Atkins JD; Salehe BR; Shuid AN; Roche DB
Nucleic Acids Res; 2015 Jul; 43(W1):W169-73. PubMed ID: 25820431
[TBL] [Abstract][Full Text] [Related]
16. DOMAC: an accurate, hybrid protein domain prediction server.
Cheng J
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W354-6. PubMed ID: 17553833
[TBL] [Abstract][Full Text] [Related]
17. Combining physicochemical and evolutionary information for protein contact prediction.
Schneider M; Brock O
PLoS One; 2014; 9(10):e108438. PubMed ID: 25338092
[TBL] [Abstract][Full Text] [Related]
18. CoinFold: a web server for protein contact prediction and contact-assisted protein folding.
Wang S; Li W; Zhang R; Liu S; Xu J
Nucleic Acids Res; 2016 Jul; 44(W1):W361-6. PubMed ID: 27112569
[TBL] [Abstract][Full Text] [Related]
19. (PS)2: protein structure prediction server.
Chen CC; Hwang JK; Yang JM
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W152-7. PubMed ID: 16844981
[TBL] [Abstract][Full Text] [Related]
20. The FALC-Loop web server for protein loop modeling.
Ko J; Lee D; Park H; Coutsias EA; Lee J; Seok C
Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W210-4. PubMed ID: 21576220
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]