165 related articles for article (PubMed ID: 25901649)
1. Comparative clinical sample preparation of DNA and RNA viral nucleic acids for a commercial deep sequencing system (Illumina MiSeq(®)).
Ullmann LS; de Camargo Tozato C; Malossi CD; da Cruz TF; Cavalcante RV; Kurissio JK; Cagnini DQ; Rodrigues MV; Biondo AW; Araujo JP
J Virol Methods; 2015 Aug; 220():60-3. PubMed ID: 25901649
[TBL] [Abstract][Full Text] [Related]
2. A performance evaluation of Nextera XT and KAPA HyperPlus for rapid Illumina library preparation of long-range mitogenome amplicons.
Ring JD; Sturk-Andreaggi K; Peck MA; Marshall C
Forensic Sci Int Genet; 2017 Jul; 29():174-180. PubMed ID: 28448897
[TBL] [Abstract][Full Text] [Related]
3. Next-generation whole genome sequencing of dengue virus.
Aw PP; de Sessions PF; Wilm A; Hoang LT; Nagarajan N; Sessions OM; Hibberd ML
Methods Mol Biol; 2014; 1138():175-95. PubMed ID: 24696338
[TBL] [Abstract][Full Text] [Related]
4. Whole genome sequence analysis of the arctic-lineage strain responsible for distemper in Italian wolves and dogs through a fast and robust next generation sequencing protocol.
Marcacci M; Ancora M; Mangone I; Teodori L; Di Sabatino D; De Massis F; Camma' C; Savini G; Lorusso A
J Virol Methods; 2014 Jun; 202():64-8. PubMed ID: 24642239
[TBL] [Abstract][Full Text] [Related]
5. DPS - a rapid method for genome sequencing of DNA-containing bacteriophages directly from a single plaque.
Kot W; Vogensen FK; Sørensen SJ; Hansen LH
J Virol Methods; 2014 Feb; 196():152-6. PubMed ID: 24239631
[TBL] [Abstract][Full Text] [Related]
6. A Survey of Virus Recombination Uncovers Canonical Features of Artificial Chimeras Generated During Deep Sequencing Library Preparation.
Peccoud J; Lequime S; Moltini-Conclois I; Giraud I; Lambrechts L; Gilbert C
G3 (Bethesda); 2018 Mar; 8(4):1129-1138. PubMed ID: 29434031
[TBL] [Abstract][Full Text] [Related]
7. An optimized methodology for whole genome sequencing of RNA respiratory viruses from nasopharyngeal aspirates.
Goya S; Valinotto LE; Tittarelli E; Rojo GL; Nabaes Jodar MS; Greninger AL; Zaiat JJ; Marti MA; Mistchenko AS; Viegas M
PLoS One; 2018; 13(6):e0199714. PubMed ID: 29940028
[TBL] [Abstract][Full Text] [Related]
8. Simultaneous and complete genome sequencing of influenza A and B with high coverage by Illumina MiSeq Platform.
Rutvisuttinunt W; Chinnawirotpisan P; Simasathien S; Shrestha SK; Yoon IK; Klungthong C; Fernandez S
J Virol Methods; 2013 Nov; 193(2):394-404. PubMed ID: 23856301
[TBL] [Abstract][Full Text] [Related]
9. Comparing Viral Metagenomic Extraction Methods.
Klenner J; Kohl C; Dabrowski PW; Nitsche A
Curr Issues Mol Biol; 2017; 24():59-70. PubMed ID: 28686568
[TBL] [Abstract][Full Text] [Related]
10. Mini-XT, a miniaturized tagmentation-based protocol for efficient sequencing of SARS-CoV-2.
Fuchs M; Radulescu C; Tang M; Mahesh A; Lavin D; Umbreen S; McKenna J; Smyth M; McColgan E; Molnar Z; Baxter C; Skvortsov T; Singh A; Rogan F; Miskelly J; Bridgett S; Fairley D; Simpson DA
J Transl Med; 2022 Mar; 20(1):105. PubMed ID: 35241105
[TBL] [Abstract][Full Text] [Related]
11. Optimization of enzymatic fragmentation is crucial to maximize genome coverage: a comparison of library preparation methods for Illumina sequencing.
Ribarska T; Bjørnstad PM; Sundaram AYM; Gilfillan GD
BMC Genomics; 2022 Feb; 23(1):92. PubMed ID: 35105301
[TBL] [Abstract][Full Text] [Related]
12. Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation.
Ng SH; Braxton C; Eloit M; Feng SF; Fragnoud R; Mallet L; Mee ET; Sathiamoorthy S; Vandeputte O; Khan AS
Viruses; 2018 Oct; 10(10):. PubMed ID: 30332784
[TBL] [Abstract][Full Text] [Related]
13. Optimization and cost-saving in tagmentation-based mate-pair library preparation and sequencing.
Tatsumi K; Nishimura O; Itomi K; Tanegashima C; Kuraku S
Biotechniques; 2015 May; 58(5):253-7. PubMed ID: 25967904
[TBL] [Abstract][Full Text] [Related]
14. A simple method for semi-random DNA amplicon fragmentation using the methylation-dependent restriction enzyme MspJI.
Shinozuka H; Cogan NO; Shinozuka M; Marshall A; Kay P; Lin YH; Spangenberg GC; Forster JW
BMC Biotechnol; 2015 Apr; 15():25. PubMed ID: 25887558
[TBL] [Abstract][Full Text] [Related]
15. Viral Concentration and Amplification from Human Serum Samples Prior to Application of Next-Generation Sequencing Analysis.
Fernandez-Cassi X; Rusiñol M; Martínez-Puchol S
Methods Mol Biol; 2018; 1838():173-188. PubMed ID: 30128997
[TBL] [Abstract][Full Text] [Related]
16. Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and Characterization.
Poates A; Truong J; Lindsey R; Griswold T; Williams-Newkirk AJ; Carleton H; Trees E
Foodborne Pathog Dis; 2022 Aug; 19(8):569-578. PubMed ID: 35861967
[TBL] [Abstract][Full Text] [Related]
17. Inexpensive multiplexed library preparation for megabase-sized genomes.
Baym M; Kryazhimskiy S; Lieberman TD; Chung H; Desai MM; Kishony R
PLoS One; 2015; 10(5):e0128036. PubMed ID: 26000737
[TBL] [Abstract][Full Text] [Related]
18. Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing.
Van den Hoecke S; Verhelst J; Vuylsteke M; Saelens X
BMC Genomics; 2015 Feb; 16(1):79. PubMed ID: 25758772
[TBL] [Abstract][Full Text] [Related]
19. High-Throughput Next-Generation Sequencing of Polioviruses.
Montmayeur AM; Ng TF; Schmidt A; Zhao K; Magaña L; Iber J; Castro CJ; Chen Q; Henderson E; Ramos E; Shaw J; Tatusov RL; Dybdahl-Sissoko N; Endegue-Zanga MC; Adeniji JA; Oberste MS; Burns CC
J Clin Microbiol; 2017 Feb; 55(2):606-615. PubMed ID: 27927929
[TBL] [Abstract][Full Text] [Related]
20. Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses.
Marine RL; Magaña LC; Castro CJ; Zhao K; Montmayeur AM; Schmidt A; Diez-Valcarce M; Ng TFF; Vinjé J; Burns CC; Nix WA; Rota PA; Oberste MS
J Virol Methods; 2020 Jun; 280():113865. PubMed ID: 32302601
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
