156 related articles for article (PubMed ID: 25948580)
1. PACCMIT/PACCMIT-CDS: identifying microRNA targets in 3' UTRs and coding sequences.
Šulc M; Marín RM; Robins HS; Vaníček J
Nucleic Acids Res; 2015 Jul; 43(W1):W474-9. PubMed ID: 25948580
[TBL] [Abstract][Full Text] [Related]
2. Searching the coding region for microRNA targets.
Marín RM; Sulc M; Vanícek J
RNA; 2013 Apr; 19(4):467-74. PubMed ID: 23404894
[TBL] [Abstract][Full Text] [Related]
3. miRmap web: Comprehensive microRNA target prediction online.
Vejnar CE; Blum M; Zdobnov EM
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W165-8. PubMed ID: 23716633
[TBL] [Abstract][Full Text] [Related]
4. Functional microRNA targets in protein coding sequences.
Reczko M; Maragkakis M; Alexiou P; Grosse I; Hatzigeorgiou AG
Bioinformatics; 2012 Mar; 28(6):771-6. PubMed ID: 22285563
[TBL] [Abstract][Full Text] [Related]
5. Functional conservation of both CDS- and 3'-UTR-located microRNA binding sites between species.
Liu G; Zhang R; Xu J; Wu CI; Lu X
Mol Biol Evol; 2015 Mar; 32(3):623-8. PubMed ID: 25414126
[TBL] [Abstract][Full Text] [Related]
6. Analysis of microRNA-target interactions by a target structure based hybridization model.
Long D; Chan CY; Ding Y
Pac Symp Biocomput; 2008; ():64-74. PubMed ID: 18232104
[TBL] [Abstract][Full Text] [Related]
7. miRNA_Targets: a database for miRNA target predictions in coding and non-coding regions of mRNAs.
Kumar A; Wong AK; Tizard ML; Moore RJ; Lefèvre C
Genomics; 2012 Dec; 100(6):352-6. PubMed ID: 22940442
[TBL] [Abstract][Full Text] [Related]
8. Optimal use of conservation and accessibility filters in microRNA target prediction.
Marín RM; Vaníček J
PLoS One; 2012; 7(2):e32208. PubMed ID: 22384176
[TBL] [Abstract][Full Text] [Related]
9. Retained introns increase putative microRNA targets within 3' UTRs of human mRNA.
Tan S; Guo J; Huang Q; Chen X; Li-Ling J; Li Q; Ma F
FEBS Lett; 2007 Mar; 581(6):1081-6. PubMed ID: 17320082
[TBL] [Abstract][Full Text] [Related]
10. ComiR: Combinatorial microRNA target prediction tool.
Coronnello C; Benos PV
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W159-64. PubMed ID: 23703208
[TBL] [Abstract][Full Text] [Related]
11. CLIP-based prediction of mammalian microRNA binding sites.
Liu C; Mallick B; Long D; Rennie WA; Wolenc A; Carmack CS; Ding Y
Nucleic Acids Res; 2013 Aug; 41(14):e138. PubMed ID: 23703212
[TBL] [Abstract][Full Text] [Related]
12. comTAR: a web tool for the prediction and characterization of conserved microRNA targets in plants.
Chorostecki U; Palatnik JF
Bioinformatics; 2014 Jul; 30(14):2066-7. PubMed ID: 24632500
[TBL] [Abstract][Full Text] [Related]
13. Fast and effective prediction of microRNA/target duplexes.
Rehmsmeier M; Steffen P; Hochsmann M; Giegerich R
RNA; 2004 Oct; 10(10):1507-17. PubMed ID: 15383676
[TBL] [Abstract][Full Text] [Related]
14. microRNA target prediction programs predict many false positives.
Pinzón N; Li B; Martinez L; Sergeeva A; Presumey J; Apparailly F; Seitz H
Genome Res; 2017 Feb; 27(2):234-245. PubMed ID: 28148562
[TBL] [Abstract][Full Text] [Related]
15. Prediction of miRNA-mRNA Interactions Using miRGate.
Andrés-León E; Gómez-López G; Pisano DG
Methods Mol Biol; 2017; 1580():225-237. PubMed ID: 28439836
[TBL] [Abstract][Full Text] [Related]
16. miRGen 2.0: a database of microRNA genomic information and regulation.
Alexiou P; Vergoulis T; Gleditzsch M; Prekas G; Dalamagas T; Megraw M; Grosse I; Sellis T; Hatzigeorgiou AG
Nucleic Acids Res; 2010 Jan; 38(Database issue):D137-41. PubMed ID: 19850714
[TBL] [Abstract][Full Text] [Related]
17. microRNA Target Prediction.
Ritchie W
Methods Mol Biol; 2017; 1513():193-200. PubMed ID: 27807838
[TBL] [Abstract][Full Text] [Related]
18. An improvement of ComiR algorithm for microRNA target prediction by exploiting coding region sequences of mRNAs.
Bertolazzi G; Benos PV; Tumminello M; Coronnello C
BMC Bioinformatics; 2020 Sep; 21(Suppl 8):201. PubMed ID: 32938407
[TBL] [Abstract][Full Text] [Related]
19. MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets.
Barenboim M; Zoltick BJ; Guo Y; Weinberger DR
Hum Mutat; 2010 Nov; 31(11):1223-32. PubMed ID: 20809528
[TBL] [Abstract][Full Text] [Related]
20. miRU: an automated plant miRNA target prediction server.
Zhang Y
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W701-4. PubMed ID: 15980567
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]