These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

140 related articles for article (PubMed ID: 25953855)

  • 1. Efficient exploration of pan-cancer networks by generalized covariance selection and interactive web content.
    Kling T; Johansson P; Sanchez J; Marinescu VD; Jörnsten R; Nelander S
    Nucleic Acids Res; 2015 Sep; 43(15):e98. PubMed ID: 25953855
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Web-TCGA: an online platform for integrated analysis of molecular cancer data sets.
    Deng M; Brägelmann J; Schultze JL; Perner S
    BMC Bioinformatics; 2016 Feb; 17():72. PubMed ID: 26852330
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Integrated Genomics for Pinpointing Survival Loci within Arm-Level Somatic Copy Number Alterations.
    Roy DM; Walsh LA; Desrichard A; Huse JT; Wu W; Gao J; Bose P; Lee W; Chan TA
    Cancer Cell; 2016 May; 29(5):737-750. PubMed ID: 27165745
    [TBL] [Abstract][Full Text] [Related]  

  • 4. UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses.
    Chandrashekar DS; Bashel B; Balasubramanya SAH; Creighton CJ; Ponce-Rodriguez I; Chakravarthi BVSK; Varambally S
    Neoplasia; 2017 Aug; 19(8):649-658. PubMed ID: 28732212
    [TBL] [Abstract][Full Text] [Related]  

  • 5. canEvolve: a web portal for integrative oncogenomics.
    Samur MK; Yan Z; Wang X; Cao Q; Munshi NC; Li C; Shah PK
    PLoS One; 2013; 8(2):e56228. PubMed ID: 23418540
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical-genomic driver associations.
    Lee H; Palm J; Grimes SM; Ji HP
    Genome Med; 2015 Oct; 7():112. PubMed ID: 26507825
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A simple
    Khurshed M; Molenaar RJ; van Noorden CJ
    Biotechniques; 2019 Oct; 67(4):172-176. PubMed ID: 31560238
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Zodiac: A Comprehensive Depiction of Genetic Interactions in Cancer by Integrating TCGA Data.
    Zhu Y; Xu Y; Helseth DL; Gulukota K; Yang S; Pesce LL; Mitra R; Müller P; Sengupta S; Guo W; Silverstein JC; Foster I; Parsad N; White KP; Ji Y
    J Natl Cancer Inst; 2015 Aug; 107(8):. PubMed ID: 25956356
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genomic and epigenetic aberrations of chromosome 1p36.13 have prognostic implications in malignancies.
    Naderi A
    Chromosome Res; 2020 Dec; 28(3-4):307-330. PubMed ID: 32816122
    [TBL] [Abstract][Full Text] [Related]  

  • 10. caOmicsV: an R package for visualizing multidimensional cancer genomic data.
    Zhang H; Meltzer PS; Davis SR
    BMC Bioinformatics; 2016 Mar; 17():141. PubMed ID: 27005934
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CAS-viewer: web-based tool for splicing-guided integrative analysis of multi-omics cancer data.
    Han S; Kim D; Kim Y; Choi K; Miller JE; Kim D; Lee Y
    BMC Med Genomics; 2018 Apr; 11(Suppl 2):25. PubMed ID: 29697367
    [TBL] [Abstract][Full Text] [Related]  

  • 12. TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas.
    Cumbo F; Fiscon G; Ceri S; Masseroli M; Weitschek E
    BMC Bioinformatics; 2017 Jan; 18(1):6. PubMed ID: 28049410
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A Practical Guide to The Cancer Genome Atlas (TCGA).
    Wang Z; Jensen MA; Zenklusen JC
    Methods Mol Biol; 2016; 1418():111-41. PubMed ID: 27008012
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MethHC: a database of DNA methylation and gene expression in human cancer.
    Huang WY; Hsu SD; Huang HY; Sun YM; Chou CH; Weng SL; Huang HD
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D856-61. PubMed ID: 25398901
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Developmental genes significantly afflicted by aberrant promoter methylation and somatic mutation predict overall survival of late-stage colorectal cancer.
    An N; Yang X; Cheng S; Wang G; Zhang K
    Sci Rep; 2015 Dec; 5():18616. PubMed ID: 26691761
    [TBL] [Abstract][Full Text] [Related]  

  • 16. MEXPRESS: visualizing expression, DNA methylation and clinical TCGA data.
    Koch A; De Meyer T; Jeschke J; Van Criekinge W
    BMC Genomics; 2015 Aug; 16(1):636. PubMed ID: 26306699
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Making Use of Cancer Genomic Databases.
    Creighton CJ
    Curr Protoc Mol Biol; 2018 Jan; 121():19.14.1-19.14.13. PubMed ID: 29337373
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Exploring cancer genomic data from the cancer genome atlas project.
    Lee JS
    BMB Rep; 2016 Nov; 49(11):607-611. PubMed ID: 27530686
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Ultranet: efficient solver for the sparse inverse covariance selection problem in gene network modeling.
    Järvstråt L; Johansson M; Gullberg U; Nilsson B
    Bioinformatics; 2013 Feb; 29(4):511-2. PubMed ID: 23267175
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cooperative genomic alteration network reveals molecular classification across 12 major cancer types.
    Zhang H; Deng Y; Zhang Y; Ping Y; Zhao H; Pang L; Zhang X; Wang L; Xu C; Xiao Y; Li X
    Nucleic Acids Res; 2017 Jan; 45(2):567-582. PubMed ID: 27899621
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.