These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

132 related articles for article (PubMed ID: 25954028)

  • 1. Systematic DNA methylation analysis of multiple cell lines reveals common and specific patterns within and across tissues of origin.
    Yang X; Shao X; Gao L; Zhang S
    Hum Mol Genet; 2015 Aug; 24(15):4374-84. PubMed ID: 25954028
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparative DNA methylation analysis to decipher common and cell type-specific patterns among multiple cell types.
    Yang X; Shao X; Gao L; Zhang S
    Brief Funct Genomics; 2016 Nov; 15(6):399-407. PubMed ID: 27107288
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Characterization of tissue-specific differential DNA methylation suggests distinct modes of positive and negative gene expression regulation.
    Wan J; Oliver VF; Wang G; Zhu H; Zack DJ; Merbs SL; Qian J
    BMC Genomics; 2015 Feb; 16(1):49. PubMed ID: 25652663
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A distinct region of the MGMT CpG island critical for transcriptional regulation is preferentially methylated in glioblastoma cells and xenografts.
    Malley DS; Hamoudi RA; Kocialkowski S; Pearson DM; Collins VP; Ichimura K
    Acta Neuropathol; 2011 May; 121(5):651-61. PubMed ID: 21287394
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Lineage-specific promoter DNA methylation patterns segregate adult progenitor cell types.
    Sørensen AL; Timoskainen S; West FD; Vekterud K; Boquest AC; Ahrlund-Richter L; Stice SL; Collas P
    Stem Cells Dev; 2010 Aug; 19(8):1257-66. PubMed ID: 19886822
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias.
    Nair SS; Coolen MW; Stirzaker C; Song JZ; Statham AL; Strbenac D; Robinson MD; Clark SJ
    Epigenetics; 2011 Jan; 6(1):34-44. PubMed ID: 20818161
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Orphan CpG islands define a novel class of highly active enhancers.
    Bell JSK; Vertino PM
    Epigenetics; 2017 Jun; 12(6):449-464. PubMed ID: 28448736
    [TBL] [Abstract][Full Text] [Related]  

  • 8. DNA methylation analysis using CpG microarrays is impaired in benzopyrene exposed cells.
    Sadikovic B; Andrews J; Rodenhiser DI
    Toxicol Appl Pharmacol; 2007 Dec; 225(3):300-9. PubMed ID: 17904174
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The CpG island promoter of the human proopiomelanocortin gene is methylated in nonexpressing normal tissue and tumors and represses expression.
    Newell-Price J; King P; Clark AJ
    Mol Endocrinol; 2001 Feb; 15(2):338-48. PubMed ID: 11158338
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Unusual distribution of DNA methylation within the hTERT CpG island in tissues and cell lines.
    Guilleret I; Benhattar J
    Biochem Biophys Res Commun; 2004 Dec; 325(3):1037-43. PubMed ID: 15541393
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the regulation of cell identity genes.
    Liu H; Liu X; Zhang S; Lv J; Li S; Shang S; Jia S; Wei Y; Wang F; Su J; Wu Q; Zhang Y
    Nucleic Acids Res; 2016 Jan; 44(1):75-94. PubMed ID: 26635396
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Chromatin modifications and genomic contexts linked to dynamic DNA methylation patterns across human cell types.
    Yan H; Zhang D; Liu H; Wei Y; Lv J; Wang F; Zhang C; Wu Q; Su J; Zhang Y
    Sci Rep; 2015 Feb; 5():8410. PubMed ID: 25673498
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Differential distribution of DNA methylation within the RASSF1A CpG island in breast cancer.
    Yan PS; Shi H; Rahmatpanah F; Hsiau TH; Hsiau AH; Leu YW; Liu JC; Huang TH
    Cancer Res; 2003 Oct; 63(19):6178-86. PubMed ID: 14559801
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-wide profiling of DNA methylation in human cancer cells.
    Ogoshi K; Hashimoto S; Nakatani Y; Qu W; Oshima K; Tokunaga K; Sugano S; Hattori M; Morishita S; Matsushima K
    Genomics; 2011 Oct; 98(4):280-7. PubMed ID: 21821115
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Integration of DNA methylation and gene transcription across nineteen cell types reveals cell type-specific and genomic region-dependent regulatory patterns.
    Tang B; Zhou Y; Wang CM; Huang TH; Jin VX
    Sci Rep; 2017 Jun; 7(1):3626. PubMed ID: 28620196
    [TBL] [Abstract][Full Text] [Related]  

  • 16. General transcription factor binding at CpG islands in normal cells correlates with resistance to de novo DNA methylation in cancer cells.
    Gebhard C; Benner C; Ehrich M; Schwarzfischer L; Schilling E; Klug M; Dietmaier W; Thiede C; Holler E; Andreesen R; Rehli M
    Cancer Res; 2010 Feb; 70(4):1398-407. PubMed ID: 20145141
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The recently identified modifier of murine metastable epialleles, Rearranged L-Myc Fusion, is involved in maintaining epigenetic marks at CpG island shores and enhancers.
    Harten SK; Oey H; Bourke LM; Bharti V; Isbel L; Daxinger L; Faou P; Robertson N; Matthews JM; Whitelaw E
    BMC Biol; 2015 Mar; 13():21. PubMed ID: 25857663
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-wide methylation analysis of retrocopy-associated CpG islands and their genomic environment.
    Grothaus K; Kanber D; Gellhaus A; Mikat B; Kolarova J; Siebert R; Wieczorek D; Horsthemke B
    Epigenetics; 2016 Mar; 11(3):216-26. PubMed ID: 26890210
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Methylation-specific PCR.
    Ku JL; Jeon YK; Park JG
    Methods Mol Biol; 2011; 791():23-32. PubMed ID: 21913069
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Functional diversity of CTCFs is encoded in their binding motifs.
    Fang R; Wang C; Skogerbo G; Zhang Z
    BMC Genomics; 2015 Aug; 16(1):649. PubMed ID: 26315019
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.