BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

201 related articles for article (PubMed ID: 26001968)

  • 1. Structure-guided sequence specificity engineering of the modification-dependent restriction endonuclease LpnPI.
    Sasnauskas G; Zagorskaitė E; Kauneckaitė K; Tamulaitiene G; Siksnys V
    Nucleic Acids Res; 2015 Jul; 43(12):6144-55. PubMed ID: 26001968
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Chemical display of pyrimidine bases flipped out by modification-dependent restriction endonucleases of MspJI and PvuRts1I families.
    Zagorskaitė E; Sasnauskas G
    PLoS One; 2014; 9(12):e114580. PubMed ID: 25486533
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA.
    Horton JR; Borgaro JG; Griggs RM; Quimby A; Guan S; Zhang X; Wilson GG; Zheng Y; Zhu Z; Cheng X
    Nucleic Acids Res; 2014 Jul; 42(12):7947-59. PubMed ID: 24895434
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHI.
    Horton JR; Nugent RL; Li A; Mabuchi MY; Fomenkov A; Cohen-Karni D; Griggs RM; Zhang X; Wilson GG; Zheng Y; Xu SY; Cheng X
    Sci Rep; 2014 Mar; 4():4246. PubMed ID: 24604015
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Mechanistic insights into the recognition of 5-methylcytosine oxidation derivatives by the SUVH5 SRA domain.
    Rajakumara E; Nakarakanti NK; Nivya MA; Satish M
    Sci Rep; 2016 Feb; 6():20161. PubMed ID: 26841909
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix.
    Horton JR; Wang H; Mabuchi MY; Zhang X; Roberts RJ; Zheng Y; Wilson GG; Cheng X
    Nucleic Acids Res; 2014 Oct; 42(19):12092-101. PubMed ID: 25262349
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Recognition of modified cytosine variants by the DNA-binding domain of methyl-directed endonuclease McrBC.
    Zagorskaitė E; Manakova E; Sasnauskas G
    FEBS Lett; 2018 Oct; 592(19):3335-3345. PubMed ID: 30194838
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Crystal structure of the modification-dependent SRA-HNH endonuclease TagI.
    Kisiala M; Copelas A; Czapinska H; Xu SY; Bochtler M
    Nucleic Acids Res; 2018 Nov; 46(19):10489-10503. PubMed ID: 30202937
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Crystal structure of the EcoKMcrA N-terminal domain (NEco): recognition of modified cytosine bases without flipping.
    Slyvka A; Zagorskaitė E; Czapinska H; Sasnauskas G; Bochtler M
    Nucleic Acids Res; 2019 Dec; 47(22):11943-11955. PubMed ID: 31724709
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine.
    Sukackaite R; Grazulis S; Tamulaitis G; Siksnys V
    Nucleic Acids Res; 2012 Aug; 40(15):7552-62. PubMed ID: 22570415
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.
    Horton JR; Mabuchi MY; Cohen-Karni D; Zhang X; Griggs RM; Samaranayake M; Roberts RJ; Zheng Y; Cheng X
    Nucleic Acids Res; 2012 Oct; 40(19):9763-73. PubMed ID: 22848107
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Activity and structure of EcoKMcrA.
    Czapinska H; Kowalska M; Zagorskaite E; Manakova E; Slyvka A; Xu SY; Siksnys V; Sasnauskas G; Bochtler M
    Nucleic Acids Res; 2018 Oct; 46(18):9829-9841. PubMed ID: 30107581
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Characterization of the 5-hydroxymethylcytosine-specific DNA restriction endonucleases.
    Borgaro JG; Zhu Z
    Nucleic Acids Res; 2013 Apr; 41(7):4198-206. PubMed ID: 23482393
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
    Tamulaitiene G; Silanskas A; Grazulis S; Zaremba M; Siksnys V
    Nucleic Acids Res; 2014 Dec; 42(22):14022-30. PubMed ID: 25429979
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Structural basis for the substrate selectivity of PvuRts1I, a 5-hydroxymethylcytosine DNA restriction endonuclease.
    Shao C; Wang C; Zang J
    Acta Crystallogr D Biol Crystallogr; 2014 Sep; 70(Pt 9):2477-86. PubMed ID: 25195760
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Crystal structure of the 5hmC specific endonuclease PvuRts1I.
    Kazrani AA; Kowalska M; Czapinska H; Bochtler M
    Nucleic Acids Res; 2014 May; 42(9):5929-36. PubMed ID: 24634440
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism.
    Arita K; Ariyoshi M; Tochio H; Nakamura Y; Shirakawa M
    Nature; 2008 Oct; 455(7214):818-21. PubMed ID: 18772891
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Investigation of restriction-modification enzymes from M. varians RFL19 with a new type of specificity toward modification of substrate.
    Butkus V; Klimasauskas S; Kersulyte D; Vaitkevicius D; Lebionka A; Janulaitis A
    Nucleic Acids Res; 1985 Aug; 13(16):5727-46. PubMed ID: 2994011
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Target recognition by EcoKI: the recognition domain is robust and restriction-deficiency commonly results from the proteolytic control of enzyme activity.
    O'Neill M; Powell LM; Murray NE
    J Mol Biol; 2001 Mar; 307(3):951-63. PubMed ID: 11273713
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DNA Base Flipping: A General Mechanism for Writing, Reading, and Erasing DNA Modifications.
    Hong S; Cheng X
    Adv Exp Med Biol; 2016; 945():321-341. PubMed ID: 27826845
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.