These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

293 related articles for article (PubMed ID: 26002883)

  • 1. pwOmics: an R package for pathway-based integration of time-series omics data using public database knowledge.
    Wachter A; Beißbarth T
    Bioinformatics; 2015 Sep; 31(18):3072-4. PubMed ID: 26002883
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data.
    Wang B; Cunningham JM; Yang XH
    Bioinformatics; 2015 Sep; 31(18):3043-5. PubMed ID: 25979472
    [TBL] [Abstract][Full Text] [Related]  

  • 3. LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor.
    Sheffield NC; Bock C
    Bioinformatics; 2016 Feb; 32(4):587-9. PubMed ID: 26508757
    [TBL] [Abstract][Full Text] [Related]  

  • 4. RepExplore: addressing technical replicate variance in proteomics and metabolomics data analysis.
    Glaab E; Schneider R
    Bioinformatics; 2015 Jul; 31(13):2235-7. PubMed ID: 25717197
    [TBL] [Abstract][Full Text] [Related]  

  • 5. lpNet: a linear programming approach to reconstruct signal transduction networks.
    Matos MR; Knapp B; Kaderali L
    Bioinformatics; 2015 Oct; 31(19):3231-3. PubMed ID: 26026168
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pathway-based visualization of cross-platform microarray datasets.
    Wrzodek C; Eichner J; Zell A
    Bioinformatics; 2012 Dec; 28(23):3021-6. PubMed ID: 23047564
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ndexr-an R package to interface with the network data exchange.
    Auer F; Hammoud Z; Ishkin A; Pratt D; Ideker T; Kramer F
    Bioinformatics; 2018 Feb; 34(4):716-717. PubMed ID: 29087446
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genomation: a toolkit to summarize, annotate and visualize genomic intervals.
    Akalin A; Franke V; Vlahoviček K; Mason CE; Schübeler D
    Bioinformatics; 2015 Apr; 31(7):1127-9. PubMed ID: 25417204
    [TBL] [Abstract][Full Text] [Related]  

  • 9. FunRich: An open access standalone functional enrichment and interaction network analysis tool.
    Pathan M; Keerthikumar S; Ang CS; Gangoda L; Quek CY; Williamson NA; Mouradov D; Sieber OM; Simpson RJ; Salim A; Bacic A; Hill AF; Stroud DA; Ryan MT; Agbinya JI; Mariadason JM; Burgess AW; Mathivanan S
    Proteomics; 2015 Aug; 15(15):2597-601. PubMed ID: 25921073
    [TBL] [Abstract][Full Text] [Related]  

  • 10. VIBE 2.0: visual integration for bayesian evaluation.
    Beagley N; Stratton KG; Webb-Robertson BJ
    Bioinformatics; 2010 Jan; 26(2):280-2. PubMed ID: 19933164
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization.
    Yu G; He QY
    Mol Biosyst; 2016 Feb; 12(2):477-9. PubMed ID: 26661513
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ivTerm-An R package for interactive visualization of functional analysis results of meta-omics data.
    Dong X; Xue H; Wei C
    J Cell Biochem; 2021 Oct; 122(10):1428-1434. PubMed ID: 34132422
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Integrative analysis of human omics data using biomolecular networks.
    Robinson JL; Nielsen J
    Mol Biosyst; 2016 Oct; 12(10):2953-64. PubMed ID: 27510223
    [TBL] [Abstract][Full Text] [Related]  

  • 14. WebArray: an online platform for microarray data analysis.
    Xia X; McClelland M; Wang Y
    BMC Bioinformatics; 2005 Dec; 6():306. PubMed ID: 16371165
    [TBL] [Abstract][Full Text] [Related]  

  • 15. integrOmics: an R package to unravel relationships between two omics datasets.
    Lê Cao KA; González I; Déjean S
    Bioinformatics; 2009 Nov; 25(21):2855-6. PubMed ID: 19706745
    [TBL] [Abstract][Full Text] [Related]  

  • 16. VANTED: A Tool for Integrative Visualization and Analysis of -Omics Data.
    Hartmann A; Jozefowicz AM
    Methods Mol Biol; 2018; 1696():261-278. PubMed ID: 29086410
    [TBL] [Abstract][Full Text] [Related]  

  • 17. BioNet: an R-Package for the functional analysis of biological networks.
    Beisser D; Klau GW; Dandekar T; Müller T; Dittrich MT
    Bioinformatics; 2010 Apr; 26(8):1129-30. PubMed ID: 20189939
    [TBL] [Abstract][Full Text] [Related]  

  • 18. rBiopaxParser--an R package to parse, modify and visualize BioPAX data.
    Kramer F; Bayerlová M; Klemm F; Bleckmann A; Beissbarth T
    Bioinformatics; 2013 Feb; 29(4):520-2. PubMed ID: 23274212
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Confero: an integrated contrast data and gene set platform for computational analysis and biological interpretation of omics data.
    Hermida L; Poussin C; Stadler MB; Gubian S; Sewer A; Gaidatzis D; Hotz HR; Martin F; Belcastro V; Cano S; Peitsch MC; Hoeng J
    BMC Genomics; 2013 Jul; 14():514. PubMed ID: 23895370
    [TBL] [Abstract][Full Text] [Related]  

  • 20. GOplot: an R package for visually combining expression data with functional analysis.
    Walter W; Sánchez-Cabo F; Ricote M
    Bioinformatics; 2015 Sep; 31(17):2912-4. PubMed ID: 25964631
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.