457 related articles for article (PubMed ID: 26036609)
1. A systematic study of normalization methods for Infinium 450K methylation data using whole-genome bisulfite sequencing data.
Wang T; Guan W; Lin J; Boutaoui N; Canino G; Luo J; Celedón JC; Chen W
Epigenetics; 2015; 10(7):662-9. PubMed ID: 26036609
[TBL] [Abstract][Full Text] [Related]
2. Guidelines for whole genome bisulphite sequencing of intact and FFPET DNA on the Illumina HiSeq X Ten.
Nair SS; Luu PL; Qu W; Maddugoda M; Huschtscha L; Reddel R; Chenevix-Trench G; Toso M; Kench JG; Horvath LG; Hayes VM; Stricker PD; Hughes TP; White DL; Rasko JEJ; Wong JJ; Clark SJ
Epigenetics Chromatin; 2018 May; 11(1):24. PubMed ID: 29807544
[TBL] [Abstract][Full Text] [Related]
3. Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.
Touleimat N; Tost J
Epigenomics; 2012 Jun; 4(3):325-41. PubMed ID: 22690668
[TBL] [Abstract][Full Text] [Related]
4. Base resolution methylome profiling: considerations in platform selection, data preprocessing and analysis.
Sun Z; Cunningham J; Slager S; Kocher JP
Epigenomics; 2015 Aug; 7(5):813-28. PubMed ID: 26366945
[TBL] [Abstract][Full Text] [Related]
5. Systematic evaluation of DNA methylation age estimation with common preprocessing methods and the Infinium MethylationEPIC BeadChip array.
McEwen LM; Jones MJ; Lin DTS; Edgar RD; Husquin LT; MacIsaac JL; Ramadori KE; Morin AM; Rider CF; Carlsten C; Quintana-Murci L; Horvath S; Kobor MS
Clin Epigenetics; 2018 Oct; 10(1):123. PubMed ID: 30326963
[TBL] [Abstract][Full Text] [Related]
6. Considerations for normalization of DNA methylation data by Illumina 450K BeadChip assay in population studies.
Yousefi P; Huen K; Aguilar Schall R; Decker A; Elboudwarej E; Quach H; Barcellos L; Holland N
Epigenetics; 2013 Nov; 8(11):1141-52. PubMed ID: 23959097
[TBL] [Abstract][Full Text] [Related]
7. Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing.
Toh H; Shirane K; Miura F; Kubo N; Ichiyanagi K; Hayashi K; Saitou M; Suyama M; Ito T; Sasaki H
BMC Genomics; 2017 Jan; 18(1):31. PubMed ID: 28056787
[TBL] [Abstract][Full Text] [Related]
8. Genome-Wide Analysis of DNA Methylation in Hematopoietic Cells: DNA Methylation Analysis by WGBS.
Jeong M; Guzman AG; Goodell MA
Methods Mol Biol; 2017; 1633():137-149. PubMed ID: 28735485
[TBL] [Abstract][Full Text] [Related]
9. An integrative approach for efficient analysis of whole genome bisulfite sequencing data.
Lee JH; Park SJ; Kenta N
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S14. PubMed ID: 26680746
[TBL] [Abstract][Full Text] [Related]
10. Predicting CpG methylation levels by integrating Infinium HumanMethylation450 BeadChip array data.
Fan S; Huang K; Ai R; Wang M; Wang W
Genomics; 2016 Apr; 107(4):132-7. PubMed ID: 26921858
[TBL] [Abstract][Full Text] [Related]
11. Evaluation of the Infinium Methylation 450K technology.
Dedeurwaerder S; Defrance M; Calonne E; Denis H; Sotiriou C; Fuks F
Epigenomics; 2011 Dec; 3(6):771-84. PubMed ID: 22126295
[TBL] [Abstract][Full Text] [Related]
12. An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform.
Marabita F; Almgren M; Lindholm ME; Ruhrmann S; Fagerström-Billai F; Jagodic M; Sundberg CJ; Ekström TJ; Teschendorff AE; Tegnér J; Gomez-Cabrero D
Epigenetics; 2013 Mar; 8(3):333-46. PubMed ID: 23422812
[TBL] [Abstract][Full Text] [Related]
13. A comparison of existing global DNA methylation assays to low-coverage whole-genome bisulfite sequencing for epidemiological studies.
Crary-Dooley FK; Tam ME; Dunaway KW; Hertz-Picciotto I; Schmidt RJ; LaSalle JM
Epigenetics; 2017 Mar; 12(3):206-214. PubMed ID: 28055307
[TBL] [Abstract][Full Text] [Related]
14. Detection of DNA Methylation by Whole-Genome Bisulfite Sequencing.
Li Q; Hermanson PJ; Springer NM
Methods Mol Biol; 2018; 1676():185-196. PubMed ID: 28986911
[TBL] [Abstract][Full Text] [Related]
15. Whole-Genome Bisulfite Sequencing for the Methylation Analysis of Insect Genomes.
Gatzmann F; Lyko F
Methods Mol Biol; 2019; 1858():141-156. PubMed ID: 30414116
[TBL] [Abstract][Full Text] [Related]
16. Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.
Pidsley R; Zotenko E; Peters TJ; Lawrence MG; Risbridger GP; Molloy P; Van Djik S; Muhlhausler B; Stirzaker C; Clark SJ
Genome Biol; 2016 Oct; 17(1):208. PubMed ID: 27717381
[TBL] [Abstract][Full Text] [Related]
17. Comparison of global DNA methylation analysis by whole genome bisulfite sequencing and the Infinium Mouse Methylation BeadChip using fresh and fresh-frozen mouse epidermis.
Meyer OS; Andersen MM; Børsting C; Morling N; Wulf HC; Philipsen PA; Lerche CM; Dyrberg Andersen J
Epigenetics; 2023 Dec; 18(1):2144574. PubMed ID: 36373380
[TBL] [Abstract][Full Text] [Related]
18. MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data.
Liao WW; Yen MR; Ju E; Hsu FM; Lam L; Chen PY
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S11. PubMed ID: 26680022
[TBL] [Abstract][Full Text] [Related]
19. Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers.
Pabinger S; Ernst K; Pulverer W; Kallmeyer R; Valdes AM; Metrustry S; Katic D; Nuzzo A; Kriegner A; Vierlinger K; Weinhaeusel A
PLoS One; 2016; 11(7):e0160227. PubMed ID: 27467908
[TBL] [Abstract][Full Text] [Related]
20. Systematic evaluation of library preparation methods and sequencing platforms for high-throughput whole genome bisulfite sequencing.
Zhou L; Ng HK; Drautz-Moses DI; Schuster SC; Beck S; Kim C; Chambers JC; Loh M
Sci Rep; 2019 Jul; 9(1):10383. PubMed ID: 31316107
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]