These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

133 related articles for article (PubMed ID: 26040958)

  • 1. ProCARs: Progressive Reconstruction of Ancestral Gene Orders.
    Perrin A; Varré JS; Blanquart S; Ouangraoua A
    BMC Genomics; 2015; 16 Suppl 5(Suppl 5):S6. PubMed ID: 26040958
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reconstruction of ancestral gene orders using intermediate genomes.
    Feijão P
    BMC Bioinformatics; 2015; 16 Suppl 14(Suppl 14):S3. PubMed ID: 26451811
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.
    Luhmann N; Lafond M; Thevenin A; Ouangraoua A; Wittler R; Chauve C
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1364-1373. PubMed ID: 28166504
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Fast ancestral gene order reconstruction of genomes with unequal gene content.
    Feijão P; Araujo E
    BMC Bioinformatics; 2016 Nov; 17(Suppl 14):413. PubMed ID: 28185578
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Reconstruction of ancestral gene orders using probabilistic and gene encoding approaches.
    Yang N; Hu F; Zhou L; Tang J
    PLoS One; 2014; 9(10):e108796. PubMed ID: 25302942
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Rearrangement-based phylogeny using the Single-Cut-or-Join operation.
    Biller P; Feijão P; Meidanis J
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(1):122-34. PubMed ID: 23702549
    [TBL] [Abstract][Full Text] [Related]  

  • 7. AGO, a Framework for the Reconstruction of Ancestral Syntenies and Gene Orders.
    Cribbie EP; Doerr D; Chauve C
    Methods Mol Biol; 2024; 2802():247-265. PubMed ID: 38819563
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A methodological framework for the reconstruction of contiguous regions of ancestral genomes and its application to mammalian genomes.
    Chauve C; Tannier E
    PLoS Comput Biol; 2008 Nov; 4(11):e1000234. PubMed ID: 19043541
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A flexible ancestral genome reconstruction method based on gapped adjacencies.
    Gagnon Y; Blanchette M; El-Mabrouk N
    BMC Bioinformatics; 2012; 13 Suppl 19(Suppl 19):S4. PubMed ID: 23281872
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Reconstruction of ancestral genomic sequences using likelihood.
    Elias I; Tuller T
    J Comput Biol; 2007 Mar; 14(2):216-37. PubMed ID: 17456016
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Minimal conflicting sets for the consecutive ones property in ancestral genome reconstruction.
    Chauve C; Hausd UU; Stephen T; You VP
    J Comput Biol; 2010 Sep; 17(9):1167-81. PubMed ID: 20874402
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ancestral animal genomes reconstruction.
    Rascol VL; Pontarotti P; Levasseur A
    Curr Opin Immunol; 2007 Oct; 19(5):542-6. PubMed ID: 17702562
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Probabilistic Reconstruction of Ancestral Gene Orders with Insertions and Deletions.
    Hu F; Zhou J; Zhou L; Tang J
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(4):667-72. PubMed ID: 26356337
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A statistically fair comparison of ancestral genome reconstructions, based on breakpoint and rearrangement distances.
    Adam Z; Sankoff D
    J Comput Biol; 2010 Sep; 17(9):1299-314. PubMed ID: 20874410
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences.
    Xu Q; Jin L; Zhang Y; Zhang X; Zheng C; Leebens-Mack JH; Sankoff D
    J Comput Biol; 2021 Nov; 28(11):1156-1179. PubMed ID: 34783601
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach.
    Chauve C; Ponty Y; Zanetti J
    BMC Bioinformatics; 2015; 16 Suppl 19(Suppl 19):S6. PubMed ID: 26696141
    [TBL] [Abstract][Full Text] [Related]  

  • 17. On the identification of conflicting contiguities in ancestral genome reconstruction.
    Ouangraoua A; Raffinot M
    J Comput Biol; 2014 Jan; 21(1):64-79. PubMed ID: 24106802
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ANGES: reconstructing ANcestral GEnomeS maps.
    Jones BR; Rajaraman A; Tannier E; Chauve C
    Bioinformatics; 2012 Sep; 28(18):2388-90. PubMed ID: 22820205
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Yeast ancestral genome reconstructions: the possibilities of computational methods II.
    Chauve C; Gavranovic H; Ouangraoua A; Tannier E
    J Comput Biol; 2010 Sep; 17(9):1097-112. PubMed ID: 20874398
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A mixture framework for inferring ancestral gene orders.
    Zhang Y; Hu F; Tang J
    BMC Genomics; 2012; 13 Suppl 1(Suppl 1):S7. PubMed ID: 22369143
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.