These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

133 related articles for article (PubMed ID: 26040958)

  • 21. A practical algorithm for estimation of the maximum likelihood ancestral reconstruction error.
    Hickey G; Blanchette M
    Pac Symp Biocomput; 2010; ():31-42. PubMed ID: 19908355
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Reconstructing ancestral genomic sequences by co-evolution: formal definitions, computational issues, and biological examples.
    Tuller T; Birin H; Kupiec M; Ruppin E
    J Comput Biol; 2010 Sep; 17(9):1327-44. PubMed ID: 20874411
    [TBL] [Abstract][Full Text] [Related]  

  • 23. DUPCAR: reconstructing contiguous ancestral regions with duplications.
    Ma J; Ratan A; Raney BJ; Suh BB; Zhang L; Miller W; Haussler D
    J Comput Biol; 2008 Oct; 15(8):1007-27. PubMed ID: 18774902
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Ancestral Genome Reconstruction on Whole Genome Level.
    Feng B; Zhou L; Tang J
    Curr Genomics; 2017 Aug; 18(4):306-315. PubMed ID: 29081686
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction.
    Rajaraman A; Ma J
    BMC Bioinformatics; 2016 Nov; 17(Suppl 14):414. PubMed ID: 28185565
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Alignments of mitochondrial genome arrangements: applications to metazoan phylogeny.
    Fritzsch G; Schlegel M; Stadler PF
    J Theor Biol; 2006 Jun; 240(4):511-20. PubMed ID: 16325206
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Mining the semantics of genome super-blocks to infer ancestral architectures.
    Jean G; Sherman DJ; Nikolski M
    J Comput Biol; 2009 Sep; 16(9):1267-84. PubMed ID: 19772437
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants.
    Rubert DP; Martinez FV; Stoye J; Doerr D
    BMC Genomics; 2020 Apr; 21(Suppl 2):273. PubMed ID: 32299356
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework.
    Luhmann N; Chauve C; Stoye J; Wittler R
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(6):2094-2100. PubMed ID: 29993816
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data.
    Rossnes R; Eidhammer I; Liberles DA
    BMC Bioinformatics; 2005 May; 6():127. PubMed ID: 15921519
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Reconstructing the architecture of the ancestral amniote genome.
    Ouangraoua A; Tannier E; Chauve C
    Bioinformatics; 2011 Oct; 27(19):2664-71. PubMed ID: 21846735
    [TBL] [Abstract][Full Text] [Related]  

  • 32. A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions.
    Bader M; Abouelhoda MI; Ohlebusch E
    BMC Bioinformatics; 2008 Dec; 9():516. PubMed ID: 19055792
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Comparative Methods for Reconstructing Ancient Genome Organization.
    Anselmetti Y; Luhmann N; BĂ©rard S; Tannier E; Chauve C
    Methods Mol Biol; 2018; 1704():343-362. PubMed ID: 29277873
    [TBL] [Abstract][Full Text] [Related]  

  • 34. New Genome Similarity Measures based on Conserved Gene Adjacencies.
    Doerr D; Kowada LAB; Araujo E; Deshpande S; Dantas S; Moret BME; Stoye J
    J Comput Biol; 2017 Jun; 24(6):616-634. PubMed ID: 28590847
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Computational Prediction of De Novo Emerged Protein-Coding Genes.
    Vakirlis N; McLysaght A
    Methods Mol Biol; 2019; 1851():63-81. PubMed ID: 30298392
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Greedy selection of species for ancestral state reconstruction on phylogenies: elimination is better than insertion.
    Li G; Ma J; Zhang L
    PLoS One; 2010 Feb; 5(2):e8985. PubMed ID: 20140213
    [TBL] [Abstract][Full Text] [Related]  

  • 37. The median problems on linear multichromosomal genomes: graph representation and fast exact solutions.
    Xu AW
    J Comput Biol; 2010 Sep; 17(9):1195-211. PubMed ID: 20874404
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Genome-scale evolution: reconstructing gene orders in the ancestral species.
    Bourque G; Pevzner PA
    Genome Res; 2002 Jan; 12(1):26-36. PubMed ID: 11779828
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Genome rearrangement with gene families.
    Sankoff D
    Bioinformatics; 1999 Nov; 15(11):909-17. PubMed ID: 10743557
    [TBL] [Abstract][Full Text] [Related]  

  • 40. MSOAR: a high-throughput ortholog assignment system based on genome rearrangement.
    Fu Z; Chen X; Vacic V; Nan P; Zhong Y; Jiang T
    J Comput Biol; 2007 Nov; 14(9):1160-75. PubMed ID: 17990975
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.