166 related articles for article (PubMed ID: 26068469)
1. RNAssess--a web server for quality assessment of RNA 3D structures.
Lukasiak P; Antczak M; Ratajczak T; Szachniuk M; Popenda M; Adamiak RW; Blazewicz J
Nucleic Acids Res; 2015 Jul; 43(W1):W502-6. PubMed ID: 26068469
[TBL] [Abstract][Full Text] [Related]
2. ModeRNA server: an online tool for modeling RNA 3D structures.
Rother M; Milanowska K; Puton T; Jeleniewicz J; Rother K; Bujnicki JM
Bioinformatics; 2011 Sep; 27(17):2441-2. PubMed ID: 21727140
[TBL] [Abstract][Full Text] [Related]
3. MultiSETTER: web server for multiple RNA structure comparison.
Čech P; Hoksza D; Svozil D
BMC Bioinformatics; 2015 Aug; 16():253. PubMed ID: 26264783
[TBL] [Abstract][Full Text] [Related]
4. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
Busch A; Backofen R
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
[TBL] [Abstract][Full Text] [Related]
5. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
Havgaard JH; Lyngsø RB; Gorodkin J
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
[TBL] [Abstract][Full Text] [Related]
6. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.
Reeder J; Steffen P; Giegerich R
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W320-4. PubMed ID: 17478505
[TBL] [Abstract][Full Text] [Related]
7. Web 3DNA--a web server for the analysis, reconstruction, and visualization of three-dimensional nucleic-acid structures.
Zheng G; Lu XJ; Olson WK
Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W240-6. PubMed ID: 19474339
[TBL] [Abstract][Full Text] [Related]
8. RDfolder: a web server for prediction of RNA secondary structure.
Ying X; Luo H; Luo J; Li W
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W150-3. PubMed ID: 15215369
[TBL] [Abstract][Full Text] [Related]
9. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
Ferrè F; Ponty Y; Lorenz WA; Clote P
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W659-68. PubMed ID: 17567620
[TBL] [Abstract][Full Text] [Related]
10. ILM: a web server for predicting RNA secondary structures with pseudoknots.
Ruan J; Stormo GD; Zhang W
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W146-9. PubMed ID: 15215368
[TBL] [Abstract][Full Text] [Related]
11. RNAMST: efficient and flexible approach for identifying RNA structural homologs.
Chang TH; Huang HD; Chuang TN; Shien DM; Horng JT
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W423-8. PubMed ID: 16845040
[TBL] [Abstract][Full Text] [Related]
12. VfoldLA: A web server for loop assembly-based prediction of putative 3D RNA structures.
Xu X; Zhao C; Chen SJ
J Struct Biol; 2019 Sep; 207(3):235-240. PubMed ID: 31173857
[TBL] [Abstract][Full Text] [Related]
13. RNAspider: a webserver to analyze entanglements in RNA 3D structures.
Luwanski K; Hlushchenko V; Popenda M; Zok T; Sarzynska J; Martsich D; Szachniuk M; Antczak M
Nucleic Acids Res; 2022 Jul; 50(W1):W663-W669. PubMed ID: 35349710
[TBL] [Abstract][Full Text] [Related]
14. NPDock: a web server for protein-nucleic acid docking.
Tuszynska I; Magnus M; Jonak K; Dawson W; Bujnicki JM
Nucleic Acids Res; 2015 Jul; 43(W1):W425-30. PubMed ID: 25977296
[TBL] [Abstract][Full Text] [Related]
15. RNA FRABASE 2.0: an advanced web-accessible database with the capacity to search the three-dimensional fragments within RNA structures.
Popenda M; Szachniuk M; Blazewicz M; Wasik S; Burke EK; Blazewicz J; Adamiak RW
BMC Bioinformatics; 2010 May; 11():231. PubMed ID: 20459631
[TBL] [Abstract][Full Text] [Related]
16. RNAPattMatch: a web server for RNA sequence/structure motif detection based on pattern matching with flexible gaps.
Drory Retwitzer M; Polishchuk M; Churkin E; Kifer I; Yakhini Z; Barash D
Nucleic Acids Res; 2015 Jul; 43(W1):W507-12. PubMed ID: 25940619
[TBL] [Abstract][Full Text] [Related]
17. SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments.
Di Tommaso P; Bussotti G; Kemena C; Capriotti E; Chatzou M; Prieto P; Notredame C
Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W356-60. PubMed ID: 24972831
[TBL] [Abstract][Full Text] [Related]
18. RNA-Redesign: a web server for fixed-backbone 3D design of RNA.
Yesselman JD; Das R
Nucleic Acids Res; 2015 Jul; 43(W1):W498-501. PubMed ID: 25964298
[TBL] [Abstract][Full Text] [Related]
19. Structure clustering features on the Sfold Web server.
Chan CY; Lawrence CE; Ding Y
Bioinformatics; 2005 Oct; 21(20):3926-8. PubMed ID: 16109749
[TBL] [Abstract][Full Text] [Related]
20. QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Kikin O; D'Antonio L; Bagga PS
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W676-82. PubMed ID: 16845096
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]