224 related articles for article (PubMed ID: 26072509)
1. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.
Safonova Y; Bonissone S; Kurpilyansky E; Starostina E; Lapidus A; Stinson J; DePalatis L; Sandoval W; Lill J; Pevzner PA
Bioinformatics; 2015 Jun; 31(12):i53-61. PubMed ID: 26072509
[TBL] [Abstract][Full Text] [Related]
2. IgSimulator: a versatile immunosequencing simulator.
Safonova Y; Lapidus A; Lill J
Bioinformatics; 2015 Oct; 31(19):3213-5. PubMed ID: 26007226
[TBL] [Abstract][Full Text] [Related]
3. ASAP - A Webserver for Immunoglobulin-Sequencing Analysis Pipeline.
Avram O; Vaisman-Mentesh A; Yehezkel D; Ashkenazy H; Pupko T; Wine Y
Front Immunol; 2018; 9():1686. PubMed ID: 30105017
[TBL] [Abstract][Full Text] [Related]
4. SAGE2: parallel human genome assembly.
Molnar M; Haghshenas E; Ilie L
Bioinformatics; 2018 Feb; 34(4):678-680. PubMed ID: 29045591
[TBL] [Abstract][Full Text] [Related]
5. Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Reads.
Shlemov A; Bankevich S; Bzikadze A; Turchaninova MA; Safonova Y; Pevzner PA
J Immunol; 2017 Nov; 199(9):3369-3380. PubMed ID: 28978691
[TBL] [Abstract][Full Text] [Related]
6. IMSEQ--a fast and error aware approach to immunogenetic sequence analysis.
Kuchenbecker L; Nienen M; Hecht J; Neumann AU; Babel N; Reinert K; Robinson PN
Bioinformatics; 2015 Sep; 31(18):2963-71. PubMed ID: 25987567
[TBL] [Abstract][Full Text] [Related]
7. ACE: accurate correction of errors using K-mer tries.
Sheikhizadeh S; de Ridder D
Bioinformatics; 2015 Oct; 31(19):3216-8. PubMed ID: 26026137
[TBL] [Abstract][Full Text] [Related]
8. BFC: correcting Illumina sequencing errors.
Li H
Bioinformatics; 2015 Sep; 31(17):2885-7. PubMed ID: 25953801
[TBL] [Abstract][Full Text] [Related]
9. Assembling short reads from jumping libraries with large insert sizes.
Vasilinetc I; Prjibelski AD; Gurevich A; Korobeynikov A; Pevzner PA
Bioinformatics; 2015 Oct; 31(20):3262-8. PubMed ID: 26040456
[TBL] [Abstract][Full Text] [Related]
10. An accurate algorithm for the detection of DNA fragments from dilution pool sequencing experiments.
Bansal V
Bioinformatics; 2018 Jan; 34(1):155-162. PubMed ID: 29036419
[TBL] [Abstract][Full Text] [Related]
11. EC: an efficient error correction algorithm for short reads.
Saha S; Rajasekaran S
BMC Bioinformatics; 2015; 16 Suppl 17(Suppl 17):S2. PubMed ID: 26678663
[TBL] [Abstract][Full Text] [Related]
12. ScaffMatch: scaffolding algorithm based on maximum weight matching.
Mandric I; Zelikovsky A
Bioinformatics; 2015 Aug; 31(16):2632-8. PubMed ID: 25890305
[TBL] [Abstract][Full Text] [Related]
13. NGS-FC: A Next-Generation Sequencing Data Format Converter.
Chunjiang Yu ; Wentao Wu ; Jing Wang ; Yuxin Lin ; Yang Yang ; Jiajia Chen ; Fei Zhu ; Bairong Shen
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(5):1683-1691. PubMed ID: 28682264
[TBL] [Abstract][Full Text] [Related]
14. Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads.
Schröder J; Hsu A; Boyle SE; Macintyre G; Cmero M; Tothill RW; Johnstone RW; Shackleton M; Papenfuss AT
Bioinformatics; 2014 Apr; 30(8):1064-1072. PubMed ID: 24389656
[TBL] [Abstract][Full Text] [Related]
15. BLESS: bloom filter-based error correction solution for high-throughput sequencing reads.
Heo Y; Wu XL; Chen D; Ma J; Hwu WM
Bioinformatics; 2014 May; 30(10):1354-62. PubMed ID: 24451628
[TBL] [Abstract][Full Text] [Related]
16. damidseq_pipeline: an automated pipeline for processing DamID sequencing datasets.
Marshall OJ; Brand AH
Bioinformatics; 2015 Oct; 31(20):3371-3. PubMed ID: 26112292
[TBL] [Abstract][Full Text] [Related]
17. Error filtering, pair assembly and error correction for next-generation sequencing reads.
Edgar RC; Flyvbjerg H
Bioinformatics; 2015 Nov; 31(21):3476-82. PubMed ID: 26139637
[TBL] [Abstract][Full Text] [Related]
18. Comparative analysis of algorithms for next-generation sequencing read alignment.
Ruffalo M; LaFramboise T; Koyutürk M
Bioinformatics; 2011 Oct; 27(20):2790-6. PubMed ID: 21856737
[TBL] [Abstract][Full Text] [Related]
19. ArchTEx: accurate extraction and visualization of next-generation sequence data.
Lai WK; Bard JE; Buck MJ
Bioinformatics; 2012 Apr; 28(7):1021-3. PubMed ID: 22302569
[TBL] [Abstract][Full Text] [Related]
20. QuorUM: An Error Corrector for Illumina Reads.
Marçais G; Yorke JA; Zimin A
PLoS One; 2015; 10(6):e0130821. PubMed ID: 26083032
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]