258 related articles for article (PubMed ID: 26080430)
1. Functional organization of the human 4D Nucleome.
Chen H; Chen J; Muir LA; Ronquist S; Meixner W; Ljungman M; Ried T; Smale S; Rajapakse I
Proc Natl Acad Sci U S A; 2015 Jun; 112(26):8002-7. PubMed ID: 26080430
[TBL] [Abstract][Full Text] [Related]
2. The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data.
Reiff SB; Schroeder AJ; Kırlı K; Cosolo A; Bakker C; Mercado L; Lee S; Veit AD; Balashov AK; Vitzthum C; Ronchetti W; Pitman KM; Johnson J; Ehmsen SR; Kerpedjiev P; Abdennur N; Imakaev M; Öztürk SU; Çamoğlu U; Mirny LA; Gehlenborg N; Alver BH; Park PJ
Nat Commun; 2022 May; 13(1):2365. PubMed ID: 35501320
[TBL] [Abstract][Full Text] [Related]
3. Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project.
Dekker J; Alber F; Aufmkolk S; Beliveau BJ; Bruneau BG; Belmont AS; Bintu L; Boettiger A; Calandrelli R; Disteche CM; Gilbert DM; Gregor T; Hansen AS; Huang B; Huangfu D; Kalhor R; Leslie CS; Li W; Li Y; Ma J; Noble WS; Park PJ; Phillips-Cremins JE; Pollard KS; Rafelski SM; Ren B; Ruan Y; Shav-Tal Y; Shen Y; Shendure J; Shu X; Strambio-De-Castillia C; Vertii A; Zhang H; Zhong S
Mol Cell; 2023 Aug; 83(15):2624-2640. PubMed ID: 37419111
[TBL] [Abstract][Full Text] [Related]
4. The epigenome, 4D nucleome and next-generation neuropsychiatric pharmacogenomics.
Higgins GA; Allyn-Feuer A; Handelman S; Sadee W; Athey BD
Pharmacogenomics; 2015; 16(14):1649-69. PubMed ID: 26338265
[TBL] [Abstract][Full Text] [Related]
5. The International Nucleome Consortium.
Tashiro S; Lanctôt C
Nucleus; 2015; 6(2):89-92. PubMed ID: 25738524
[TBL] [Abstract][Full Text] [Related]
6. The 3D organization of genome in the nucleus: from the nucleosome to the 4D nucleome.
Li G
Sci China Life Sci; 2020 Jun; 63(6):791-794. PubMed ID: 32394246
[No Abstract] [Full Text] [Related]
7. Elucidating the structure and function of the nucleus-The NIH Common Fund 4D Nucleome program.
Roy AL; Conroy RS; Taylor VG; Mietz J; Fingerman IM; Pazin MJ; Smith P; Hutter CM; Singer DS; Wilder EL
Mol Cell; 2023 Feb; 83(3):335-342. PubMed ID: 36640770
[TBL] [Abstract][Full Text] [Related]
8. A network biology study on circadian rhythm by integrating various omics data.
Wang Y; Zhang XS; Chen L
OMICS; 2009 Aug; 13(4):313-24. PubMed ID: 19645592
[TBL] [Abstract][Full Text] [Related]
9. Mining the topography and dynamics of the 4D Nucleome to identify novel CNS drug pathways.
Higgins GA; Allyn-Feuer A; Georgoff P; Nikolian V; Alam HB; Athey BD
Methods; 2017 Jul; 123():102-118. PubMed ID: 28385536
[TBL] [Abstract][Full Text] [Related]
10. 4D nucleome Analysis Toolbox: analysis of Hi-C data with abnormal karyotype and time series capabilities.
Seaman L; Rajapakse I
Bioinformatics; 2018 Jan; 34(1):104-106. PubMed ID: 28961756
[TBL] [Abstract][Full Text] [Related]
11. Functional organization of the maternal and paternal human 4D Nucleome.
Lindsly S; Jia W; Chen H; Liu S; Ronquist S; Chen C; Wen X; Stansbury C; Dotson GA; Ryan C; Rehemtulla A; Omenn GS; Wicha M; Li SC; Muir L; Rajapakse I
iScience; 2021 Dec; 24(12):103452. PubMed ID: 34877507
[TBL] [Abstract][Full Text] [Related]
12. Nucleome Analysis Reveals Structure-Function Relationships for Colon Cancer.
Seaman L; Chen H; Brown M; Wangsa D; Patterson G; Camps J; Omenn GS; Ried T; Rajapakse I
Mol Cancer Res; 2017 Jul; 15(7):821-830. PubMed ID: 28258094
[TBL] [Abstract][Full Text] [Related]
13. Insight into dynamic genome imaging: Canonical framework identification and high-throughput analysis.
Ronquist S; Meixner W; Rajapakse I; Snyder J
Methods; 2017 Jul; 123():119-127. PubMed ID: 28461134
[TBL] [Abstract][Full Text] [Related]
14. [Spatial organization of house-keeping genes in interphase nuclei].
Gushchanskaia ES; Artemov AA; Ul'ianov SV; Penin AA; Logacheva MD; Razin SV; Gavrilov AA
Mol Biol (Mosk); 2014; 48(6):1008-18. PubMed ID: 25845242
[TBL] [Abstract][Full Text] [Related]
15. The 4D nucleome in Kraków - Prospects for an emerging field.
Dobrucki J; Saitoh N
Nucleus; 2017 Sep; 8(5):447-448. PubMed ID: 28745542
[TBL] [Abstract][Full Text] [Related]
16. 4DNvestigator: time series genomic data analysis toolbox.
Lindsly S; Chen C; Liu S; Ronquist S; Dilworth S; Perlman M; Rajapakse I
Nucleus; 2021 Dec; 12(1):58-64. PubMed ID: 33794739
[TBL] [Abstract][Full Text] [Related]
17. A predictive computational model of the dynamic 3D interphase yeast nucleus.
Wong H; Marie-Nelly H; Herbert S; Carrivain P; Blanc H; Koszul R; Fabre E; Zimmer C
Curr Biol; 2012 Oct; 22(20):1881-90. PubMed ID: 22940469
[TBL] [Abstract][Full Text] [Related]
18. USP2 regulates the intracellular localization of PER1 and circadian gene expression.
Yang Y; Duguay D; Fahrenkrug J; Cermakian N; Wing SS
J Biol Rhythms; 2014 Aug; 29(4):243-56. PubMed ID: 25238854
[TBL] [Abstract][Full Text] [Related]
19. Chronobiology of micturition: putative role of the circadian clock.
Negoro H; Kanematsu A; Yoshimura K; Ogawa O
J Urol; 2013 Sep; 190(3):843-9. PubMed ID: 23429068
[TBL] [Abstract][Full Text] [Related]
20. Clock gene expression in human and mouse hepatic models shows similar periodicity but different dynamics of variation.
Mazzoccoli G; Rubino R; Tiberio C; Giuliani F; Vinciguerra M; Oben J; De Cata A; Tarquini R; De Cosmo S; Liu S; Cai Y
Chronobiol Int; 2016; 33(2):181-90. PubMed ID: 26980725
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
