These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 26098299)

  • 21. HISEA: HIerarchical SEed Aligner for PacBio data.
    Khiste N; Ilie L
    BMC Bioinformatics; 2017 Dec; 18(1):564. PubMed ID: 29258419
    [TBL] [Abstract][Full Text] [Related]  

  • 22. RF: a method for filtering short reads with tandem repeats for genome mapping.
    Misawa K
    Genomics; 2013 Jul; 102(1):35-7. PubMed ID: 23542167
    [TBL] [Abstract][Full Text] [Related]  

  • 23. V-GAP: Viral genome assembly pipeline.
    Nakamura Y; Yasuike M; Nishiki I; Iwasaki Y; Fujiwara A; Kawato Y; Nakai T; Nagai S; Kobayashi T; Gojobori T; Ototake M
    Gene; 2016 Feb; 576(2 Pt 1):676-80. PubMed ID: 26475935
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Methods for assembling reads and producing contigs.
    Orlandini V; Fondi M; Fani R
    Methods Mol Biol; 2015; 1231():151-61. PubMed ID: 25343864
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Multi-CAR: a tool of contig scaffolding using multiple references.
    Chen KT; Chen CJ; Shen HT; Liu CL; Huang SH; Lu CL
    BMC Bioinformatics; 2016 Dec; 17(Suppl 17):469. PubMed ID: 28155633
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Genome assembly and haplotyping with Hi-C.
    Korbel JO; Lee C
    Nat Biotechnol; 2013 Dec; 31(12):1099-101. PubMed ID: 24316648
    [No Abstract]   [Full Text] [Related]  

  • 27. A de novo metagenomic assembly program for shotgun DNA reads.
    Lai B; Ding R; Li Y; Duan L; Zhu H
    Bioinformatics; 2012 Jun; 28(11):1455-62. PubMed ID: 22495746
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Facilitated sequence assembly using densely labeled optical DNA barcodes: A combinatorial auction approach.
    Dvirnas A; Pichler C; Stewart CL; Quaderi S; Nyberg LK; Müller V; Kumar Bikkarolla S; Kristiansson E; Sandegren L; Westerlund F; Ambjörnsson T
    PLoS One; 2018; 13(3):e0193900. PubMed ID: 29522539
    [TBL] [Abstract][Full Text] [Related]  

  • 29. FastEtch: A Fast Sketch-Based Assembler for Genomes.
    Ghosh P; Kalyanaraman A
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1091-1106. PubMed ID: 28910776
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Predicting genome terminus sequences of Bacillus cereus-group bacteriophage using next generation sequencing data.
    Chung CH; Walter MH; Yang L; Chen SG; Winston V; Thomas MA
    BMC Genomics; 2017 May; 18(1):350. PubMed ID: 28472946
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Graph accordance of next-generation sequence assemblies.
    Yao G; Ye L; Gao H; Minx P; Warren WC; Weinstock GM
    Bioinformatics; 2012 Jan; 28(1):13-6. PubMed ID: 22025481
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Sequence assembly using next generation sequencing data--challenges and solutions.
    Chin FY; Leung HC; Yiu SM
    Sci China Life Sci; 2014 Nov; 57(11):1140-8. PubMed ID: 25326069
    [TBL] [Abstract][Full Text] [Related]  

  • 33. De novo detection of copy number variation by co-assembly.
    Nijkamp JF; van den Broek MA; Geertman JM; Reinders MJ; Daran JM; de Ridder D
    Bioinformatics; 2012 Dec; 28(24):3195-202. PubMed ID: 23047563
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Direct comparison of performance of single nucleotide variant calling in human genome with alignment-based and assembly-based approaches.
    Wu L; Yavas G; Hong H; Tong W; Xiao W
    Sci Rep; 2017 Sep; 7(1):10963. PubMed ID: 28887485
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Efficient and scalable scaffolding using optical restriction maps.
    Saha S; Rajasekaran S
    BMC Genomics; 2014; 15 Suppl 5(Suppl 5):S5. PubMed ID: 25081913
    [TBL] [Abstract][Full Text] [Related]  

  • 36. QuorUM: An Error Corrector for Illumina Reads.
    Marçais G; Yorke JA; Zimin A
    PLoS One; 2015; 10(6):e0130821. PubMed ID: 26083032
    [TBL] [Abstract][Full Text] [Related]  

  • 37. InteMAP: Integrated metagenomic assembly pipeline for NGS short reads.
    Lai B; Wang F; Wang X; Duan L; Zhu H
    BMC Bioinformatics; 2015 Aug; 16():244. PubMed ID: 26250558
    [TBL] [Abstract][Full Text] [Related]  

  • 38. DIME: a novel framework for de novo metagenomic sequence assembly.
    Guo X; Yu N; Ding X; Wang J; Pan Y
    J Comput Biol; 2015 Feb; 22(2):159-77. PubMed ID: 25684202
    [TBL] [Abstract][Full Text] [Related]  

  • 39. VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data.
    Ren J; Ahlgren NA; Lu YY; Fuhrman JA; Sun F
    Microbiome; 2017 Jul; 5(1):69. PubMed ID: 28683828
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Hybrid sequencing and map finding (HySeMaFi): optional strategies for extensively deciphering gene splicing and expression in organisms without reference genome.
    Ning G; Cheng X; Luo P; Liang F; Wang Z; Yu G; Li X; Wang D; Bao M
    Sci Rep; 2017 Mar; 7():43793. PubMed ID: 28272530
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.