BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

300 related articles for article (PubMed ID: 26112292)

  • 41. SAGE2: parallel human genome assembly.
    Molnar M; Haghshenas E; Ilie L
    Bioinformatics; 2018 Feb; 34(4):678-680. PubMed ID: 29045591
    [TBL] [Abstract][Full Text] [Related]  

  • 42. ReliableGenome: annotation of genomic regions with high/low variant calling concordance.
    Popitsch N; ; Schuh A; Taylor JC
    Bioinformatics; 2017 Jan; 33(2):155-160. PubMed ID: 27605105
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Non-referenced genome assembly from epigenomic short-read data.
    Kaspi A; Ziemann M; Keating ST; Khurana I; Connor T; Spolding B; Cooper A; Lazarus R; Walder K; Zimmet P; El-Osta A
    Epigenetics; 2014 Oct; 9(10):1329-38. PubMed ID: 25437048
    [TBL] [Abstract][Full Text] [Related]  

  • 44. MAGenTA: a Galaxy implemented tool for complete Tn-Seq analysis and data visualization.
    McCoy KM; Antonio ML; van Opijnen T
    Bioinformatics; 2017 Sep; 33(17):2781-2783. PubMed ID: 28498899
    [TBL] [Abstract][Full Text] [Related]  

  • 45. A computational genomics pipeline for prokaryotic sequencing projects.
    Kislyuk AO; Katz LS; Agrawal S; Hagen MS; Conley AB; Jayaraman P; Nelakuditi V; Humphrey JC; Sammons SA; Govil D; Mair RD; Tatti KM; Tondella ML; Harcourt BH; Mayer LW; Jordan IK
    Bioinformatics; 2010 Aug; 26(15):1819-26. PubMed ID: 20519285
    [TBL] [Abstract][Full Text] [Related]  

  • 46. FastqCLS: a FASTQ compressor for long-read sequencing via read reordering using a novel scoring model.
    Lee D; Song G
    Bioinformatics; 2022 Jan; 38(2):351-356. PubMed ID: 34623374
    [TBL] [Abstract][Full Text] [Related]  

  • 47. KNIME4NGS: a comprehensive toolbox for next generation sequencing analysis.
    Hastreiter M; Jeske T; Hoser J; Kluge M; Ahomaa K; Friedl MS; Kopetzky SJ; Quell JD; Mewes HW; Küffner R
    Bioinformatics; 2017 May; 33(10):1565-1567. PubMed ID: 28069593
    [TBL] [Abstract][Full Text] [Related]  

  • 48. GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments.
    van Heeringen SJ; Veenstra GJ
    Bioinformatics; 2011 Jan; 27(2):270-1. PubMed ID: 21081511
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Simulating the dynamics of targeted capture sequencing with CapSim.
    Cao MD; Ganesamoorthy D; Zhou C; Coin LJM
    Bioinformatics; 2018 Mar; 34(5):873-874. PubMed ID: 29092025
    [TBL] [Abstract][Full Text] [Related]  

  • 50. fqtools: an efficient software suite for modern FASTQ file manipulation.
    Droop AP
    Bioinformatics; 2016 Jun; 32(12):1883-4. PubMed ID: 27153699
    [TBL] [Abstract][Full Text] [Related]  

  • 51. A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data.
    Siretskiy A; Sundqvist T; Voznesenskiy M; Spjuth O
    Gigascience; 2015; 4():26. PubMed ID: 26045962
    [TBL] [Abstract][Full Text] [Related]  

  • 52. ANAQUIN: a software toolkit for the analysis of spike-in controls for next generation sequencing.
    Wong T; Deveson IW; Hardwick SA; Mercer TR
    Bioinformatics; 2017 Jun; 33(11):1723-1724. PubMed ID: 28130232
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Normalization and noise reduction for single cell RNA-seq experiments.
    Ding B; Zheng L; Zhu Y; Li N; Jia H; Ai R; Wildberg A; Wang W
    Bioinformatics; 2015 Jul; 31(13):2225-7. PubMed ID: 25717193
    [TBL] [Abstract][Full Text] [Related]  

  • 54. QuasR: quantification and annotation of short reads in R.
    Gaidatzis D; Lerch A; Hahne F; Stadler MB
    Bioinformatics; 2015 Apr; 31(7):1130-2. PubMed ID: 25417205
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Deconvolution of multiple infections in Plasmodium falciparum from high throughput sequencing data.
    Zhu SJ; Almagro-Garcia J; McVean G
    Bioinformatics; 2018 Jan; 34(1):9-15. PubMed ID: 28961721
    [TBL] [Abstract][Full Text] [Related]  

  • 56. TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets.
    Dang LT; Tondl M; Chiu MHH; Revote J; Paten B; Tano V; Tokolyi A; Besse F; Quaife-Ryan G; Cumming H; Drvodelic MJ; Eichenlaub MP; Hallab JC; Stolper JS; Rossello FJ; Bogoyevitch MA; Jans DA; Nim HT; Porrello ER; Hudson JE; Ramialison M
    BMC Genomics; 2018 Apr; 19(1):238. PubMed ID: 29621972
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Bayexer: an accurate and fast Bayesian demultiplexer for Illumina sequences.
    Yi H; Li Z; Li T; Zhao J
    Bioinformatics; 2015 Dec; 31(24):4000-2. PubMed ID: 26315903
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Cas-analyzer: an online tool for assessing genome editing results using NGS data.
    Park J; Lim K; Kim JS; Bae S
    Bioinformatics; 2017 Jan; 33(2):286-288. PubMed ID: 27559154
    [TBL] [Abstract][Full Text] [Related]  

  • 59. panISa: ab initio detection of insertion sequences in bacterial genomes from short read sequence data.
    Treepong P; Guyeux C; Meunier A; Couchoud C; Hocquet D; Valot B
    Bioinformatics; 2018 Nov; 34(22):3795-3800. PubMed ID: 29931098
    [TBL] [Abstract][Full Text] [Related]  

  • 60. The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries.
    Barquist L; Mayho M; Cummins C; Cain AK; Boinett CJ; Page AJ; Langridge GC; Quail MA; Keane JA; Parkhill J
    Bioinformatics; 2016 Apr; 32(7):1109-11. PubMed ID: 26794317
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 15.