These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

75 related articles for article (PubMed ID: 26138156)

  • 1. Restricted mobility of side chains on concave surfaces of solenoid proteins may impart heightened potential for intermolecular interactions.
    Ramya L; Gautham N; Chaloin L; Kajava AV
    Proteins; 2015 Sep; 83(9):1654-64. PubMed ID: 26138156
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Free-energy landscapes of protein domain movements upon ligand binding.
    Kondo HX; Okimoto N; Morimoto G; Taiji M
    J Phys Chem B; 2011 Jun; 115(23):7629-36. PubMed ID: 21608983
    [TBL] [Abstract][Full Text] [Related]  

  • 3. How different are structurally flexible and rigid binding sites? Sequence and structural features discriminating proteins that do and do not undergo conformational change upon ligand binding.
    Gunasekaran K; Nussinov R
    J Mol Biol; 2007 Jan; 365(1):257-73. PubMed ID: 17059826
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Identification of protein binding surfaces using surface triplet propensities.
    Mehio W; Kemp GJ; Taylor P; Walkinshaw MD
    Bioinformatics; 2010 Oct; 26(20):2549-55. PubMed ID: 20819959
    [TBL] [Abstract][Full Text] [Related]  

  • 5. FlexE: efficient molecular docking considering protein structure variations.
    Claussen H; Buning C; Rarey M; Lengauer T
    J Mol Biol; 2001 Apr; 308(2):377-95. PubMed ID: 11327774
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Non-interacting surface solvation and dynamics in protein-protein interactions.
    Visscher KM; Kastritis PL; Bonvin AM
    Proteins; 2015 Mar; 83(3):445-58. PubMed ID: 25524313
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Analysis of ligand-bound water molecules in high-resolution crystal structures of protein-ligand complexes.
    Lu Y; Wang R; Yang CY; Wang S
    J Chem Inf Model; 2007; 47(2):668-75. PubMed ID: 17266298
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ProMate: a structure based prediction program to identify the location of protein-protein binding sites.
    Neuvirth H; Raz R; Schreiber G
    J Mol Biol; 2004 Apr; 338(1):181-99. PubMed ID: 15050833
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Examination of shape complementarity in docking of unbound proteins.
    Norel R; Petrey D; Wolfson HJ; Nussinov R
    Proteins; 1999 Aug; 36(3):307-17. PubMed ID: 10409824
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Implications of the small number of distinct ligand binding pockets in proteins for drug discovery, evolution and biochemical function.
    Skolnick J; Gao M; Roy A; Srinivasan B; Zhou H
    Bioorg Med Chem Lett; 2015 Mar; 25(6):1163-70. PubMed ID: 25690787
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hydration properties of ligands and drugs in protein binding sites: tightly-bound, bridging water molecules and their effects and consequences on molecular design strategies.
    García-Sosa AT
    J Chem Inf Model; 2013 Jun; 53(6):1388-405. PubMed ID: 23662606
    [TBL] [Abstract][Full Text] [Related]  

  • 12. FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function.
    Taylor RD; Jewsbury PJ; Essex JW
    J Comput Chem; 2003 Oct; 24(13):1637-56. PubMed ID: 12926007
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Strain in protein structures as viewed through nonrotameric side chains: II. effects upon ligand binding.
    Heringa J; Argos P
    Proteins; 1999 Oct; 37(1):44-55. PubMed ID: 10451549
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computational method to identify druggable binding sites that target protein-protein interactions.
    Li H; Kasam V; Tautermann CS; Seeliger D; Vaidehi N
    J Chem Inf Model; 2014 May; 54(5):1391-400. PubMed ID: 24762202
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
    Eberini I; Guerini Rocco A; Ientile AR; Baptista AM; Gianazza E; Tomaselli S; Molinari H; Ragona L
    Proteins; 2008 Jun; 71(4):1889-98. PubMed ID: 18175325
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Beta-rolls, beta-helices, and other beta-solenoid proteins.
    Kajava AV; Steven AC
    Adv Protein Chem; 2006; 73():55-96. PubMed ID: 17190611
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Interactions in native binding sites cause a large change in protein dynamics.
    Ming D; Wall ME
    J Mol Biol; 2006 Apr; 358(1):213-23. PubMed ID: 16513135
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A new test set for validating predictions of protein-ligand interaction.
    Nissink JW; Murray C; Hartshorn M; Verdonk ML; Cole JC; Taylor R
    Proteins; 2002 Dec; 49(4):457-71. PubMed ID: 12402356
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Bona fide prediction of aspects of protein conformation. Assigning interior and surface residues from patterns of variation and conservation in homologous protein sequences.
    Benner SA; Badcoe I; Cohen MA; Gerloff DL
    J Mol Biol; 1994 Jan; 235(3):926-58. PubMed ID: 8289328
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Docking ligands into flexible and solvated macromolecules. 1. Development and validation of FITTED 1.0.
    Corbeil CR; Englebienne P; Moitessier N
    J Chem Inf Model; 2007; 47(2):435-49. PubMed ID: 17305329
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.