BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

208 related articles for article (PubMed ID: 26144884)

  • 1. Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.
    Trausch JJ; Marcano-Velázquez JG; Matyjasik MM; Batey RT
    Chem Biol; 2015 Jul; 22(7):829-37. PubMed ID: 26144884
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism.
    Ren A; Rajashankar KR; Patel DJ
    Structure; 2015 Aug; 23(8):1375-1381. PubMed ID: 26118534
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Recognition of the bacterial alarmone ZMP through long-distance association of two RNA subdomains.
    Jones CP; Ferré-D'Amaré AR
    Nat Struct Mol Biol; 2015 Sep; 22(9):679-85. PubMed ID: 26280533
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An ancient riboswitch class in bacteria regulates purine biosynthesis and one-carbon metabolism.
    Kim PB; Nelson JW; Breaker RR
    Mol Cell; 2015 Jan; 57(2):317-28. PubMed ID: 25616067
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Parallel Discovery Strategies Provide a Basis for Riboswitch Ligand Design.
    Tran B; Pichling P; Tenney L; Connelly CM; Moon MH; Ferré-D'Amaré AR; Schneekloth JS; Jones CP
    Cell Chem Biol; 2020 Oct; 27(10):1241-1249.e4. PubMed ID: 32795418
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain.
    Noeske J; Schwalbe H; Wöhnert J
    Nucleic Acids Res; 2007; 35(15):5262-73. PubMed ID: 17686787
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics simulation on the Thermosinus carboxydivorans pfl ZTP riboswitch by ligand binding.
    Yu-Nan H; Kang W; Yu S; Xiao-Jun X; Yan W; Xing-Ao L; Ting-Ting S
    Biochem Biophys Res Commun; 2022 Oct; 627():184-190. PubMed ID: 36044800
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The conformational landscape of transcription intermediates involved in the regulation of the ZMP-sensing riboswitch from Thermosinus carboxydivorans.
    Binas O; Schamber T; Schwalbe H
    Nucleic Acids Res; 2020 Jul; 48(12):6970-6979. PubMed ID: 32479610
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser.
    Jones C; Tran B; Conrad C; Stagno J; Trachman R; Fischer P; Meents A; Ferré-D'Amaré A
    Acta Crystallogr F Struct Biol Commun; 2019 Jul; 75(Pt 7):496-500. PubMed ID: 31282869
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pseudoknot preorganization of the preQ1 class I riboswitch.
    Santner T; Rieder U; Kreutz C; Micura R
    J Am Chem Soc; 2012 Jul; 134(29):11928-31. PubMed ID: 22775200
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ZTP (5-amino 4-imidazole carboxamide riboside 5'-triphosphate): a proposed alarmone for 10-formyl-tetrahydrofolate deficiency.
    Bochner BR; Ames BN
    Cell; 1982 Jul; 29(3):929-37. PubMed ID: 6185232
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The ancient alarmone ZTP and zinc homeostasis in Bacillus subtilis.
    Nies DH
    Mol Microbiol; 2019 Sep; 112(3):741-746. PubMed ID: 31220391
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural Basis for Ligand Binding to the Guanidine-I Riboswitch.
    Reiss CW; Xiong Y; Strobel SA
    Structure; 2017 Jan; 25(1):195-202. PubMed ID: 28017522
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain.
    Gilbert SD; Stoddard CD; Wise SJ; Batey RT
    J Mol Biol; 2006 Jun; 359(3):754-68. PubMed ID: 16650860
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
    Huang L; Ishibe-Murakami S; Patel DJ; Serganov A
    Proc Natl Acad Sci U S A; 2011 Sep; 108(36):14801-6. PubMed ID: 21873197
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control.
    Strobel EJ; Cheng L; Berman KE; Carlson PD; Lucks JB
    Nat Chem Biol; 2019 Nov; 15(11):1067-1076. PubMed ID: 31636437
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Multiple metal-binding cores are required for metalloregulation by M-box riboswitch RNAs.
    Wakeman CA; Ramesh A; Winkler WC
    J Mol Biol; 2009 Sep; 392(3):723-35. PubMed ID: 19619558
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Role of purine biosynthetic intermediates in response to folate stress in Escherichia coli.
    Rohlman CE; Matthews RG
    J Bacteriol; 1990 Dec; 172(12):7200-10. PubMed ID: 2254281
    [TBL] [Abstract][Full Text] [Related]  

  • 19. RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme.
    Miao Z; Adamiak RW; Antczak M; Batey RT; Becka AJ; Biesiada M; Boniecki MJ; Bujnicki JM; Chen SJ; Cheng CY; Chou FC; Ferré-D'Amaré AR; Das R; Dawson WK; Ding F; Dokholyan NV; Dunin-Horkawicz S; Geniesse C; Kappel K; Kladwang W; Krokhotin A; Łach GE; Major F; Mann TH; Magnus M; Pachulska-Wieczorek K; Patel DJ; Piccirilli JA; Popenda M; Purzycka KJ; Ren A; Rice GM; Santalucia J; Sarzynska J; Szachniuk M; Tandon A; Trausch JJ; Tian S; Wang J; Weeks KM; Williams B; Xiao Y; Xu X; Zhang D; Zok T; Westhof E
    RNA; 2017 May; 23(5):655-672. PubMed ID: 28138060
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
    Xu X; Egger M; Chen H; Bartosik K; Micura R; Ren A
    Nucleic Acids Res; 2021 Jul; 49(12):7139-7153. PubMed ID: 34125892
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.