BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

331 related articles for article (PubMed ID: 26177039)

  • 21. New Knowledge-Based Scoring Function with Inclusion of Backbone Conformational Entropies from Protein Structures.
    Wang X; Zhang D; Huang SY
    J Chem Inf Model; 2018 Mar; 58(3):724-732. PubMed ID: 29443525
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Conformational Entropies and Order Parameters: Convergence, Reproducibility, and Transferability.
    Genheden S; Akke M; Ryde U
    J Chem Theory Comput; 2014 Jan; 10(1):432-8. PubMed ID: 26579922
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery.
    Kalescky R; Zhou H; Liu J; Tao P
    PLoS Comput Biol; 2016 Apr; 12(4):e1004893. PubMed ID: 27115535
    [TBL] [Abstract][Full Text] [Related]  

  • 24. On the relationship between NMR-derived amide order parameters and protein backbone entropy changes.
    Sharp KA; O'Brien E; Kasinath V; Wand AJ
    Proteins; 2015 May; 83(5):922-30. PubMed ID: 25739366
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Configurational Entropy Components and Their Contribution to Biomolecular Complex Formation.
    Fleck M; Zagrovic B
    J Chem Theory Comput; 2019 Jun; 15(6):3844-3853. PubMed ID: 31042036
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
    Eberini I; Guerini Rocco A; Ientile AR; Baptista AM; Gianazza E; Tomaselli S; Molinari H; Ragona L
    Proteins; 2008 Jun; 71(4):1889-98. PubMed ID: 18175325
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Microscopic insights into the NMR relaxation-based protein conformational entropy meter.
    Kasinath V; Sharp KA; Wand AJ
    J Am Chem Soc; 2013 Oct; 135(40):15092-100. PubMed ID: 24007504
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Probing Conformational Exchange Dynamics in a Short-Lived Protein Folding Intermediate by Real-Time Relaxation-Dispersion NMR.
    Franco R; Gil-Caballero S; Ayala I; Favier A; Brutscher B
    J Am Chem Soc; 2017 Jan; 139(3):1065-1068. PubMed ID: 28067496
    [TBL] [Abstract][Full Text] [Related]  

  • 29. [Molecular Simulations of Protein Systems toward Drug Discovery].
    Sakae Y; Nishikawa N; Tsukamoto S; Suzuki T; Okamoto Y
    Yakugaku Zasshi; 2016; 136(1):113-20. PubMed ID: 26725678
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Conformational entropy of biomolecules: beyond the quasi-harmonic approximation.
    Numata J; Wan M; Knapp EW
    Genome Inform; 2007; 18():192-205. PubMed ID: 18546487
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Conformational Entropy from Mobile Bond Vectors in Proteins: A Viewpoint that Unifies NMR Relaxation Theory and Molecular Dynamics Simulation Approaches.
    Mendelman N; Zerbetto M; Buck M; Meirovitch E
    J Phys Chem B; 2020 Oct; 124(42):9323-9334. PubMed ID: 32981310
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Predicting conformational entropy of bond vectors in proteins by networks of coupled rotators.
    Dhulesia A; Bodenhausen G; Abergel D
    J Chem Phys; 2008 Sep; 129(9):095107. PubMed ID: 19044895
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Self-Consistent Framework Connecting Experimental Proxies of Protein Dynamics with Configurational Entropy.
    Fleck M; Polyansky AA; Zagrovic B
    J Chem Theory Comput; 2018 Jul; 14(7):3796-3810. PubMed ID: 29799751
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The normal-mode entropy in the MM/GBSA method: effect of system truncation, buffer region, and dielectric constant.
    Genheden S; Kuhn O; Mikulskis P; Hoffmann D; Ryde U
    J Chem Inf Model; 2012 Aug; 52(8):2079-88. PubMed ID: 22817270
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Calculation of Configurational Entropy Differences from Conformational Ensembles Using Gaussian Mixtures.
    Gyimesi G; Závodszky P; Szilágyi A
    J Chem Theory Comput; 2017 Jan; 13(1):29-41. PubMed ID: 27958758
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Oligomeric states along the folding pathways of β2-microglobulin: kinetics, thermodynamics, and structure.
    Rennella E; Cutuil T; Schanda P; Ayala I; Gabel F; Forge V; Corazza A; Esposito G; Brutscher B
    J Mol Biol; 2013 Aug; 425(15):2722-36. PubMed ID: 23648836
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Side-chain entropy effects on protein secondary structure formation.
    Chellgren BW; Creamer TP
    Proteins; 2006 Feb; 62(2):411-20. PubMed ID: 16315271
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A dictionary for protein side-chain entropies from NMR order parameters.
    Li DW; Brüschweiler R
    J Am Chem Soc; 2009 Jun; 131(21):7226-7. PubMed ID: 19422234
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Principles of carbopeptoid folding: a molecular dynamics simulation study.
    Baron R; Bakowies D; van Gunsteren WF
    J Pept Sci; 2005 Feb; 11(2):74-84. PubMed ID: 15635631
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Shortening a loop can increase protein native state entropy.
    Gavrilov Y; Dagan S; Levy Y
    Proteins; 2015 Dec; 83(12):2137-46. PubMed ID: 26369935
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 17.