These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

234 related articles for article (PubMed ID: 26183423)

  • 21. Accelerating the convergence of path integral dynamics with a generalized Langevin equation.
    Ceriotti M; Manolopoulos DE; Parrinello M
    J Chem Phys; 2011 Feb; 134(8):084104. PubMed ID: 21361524
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Collective Langevin dynamics of conformational motions in proteins.
    Lange OF; Grubmüller H
    J Chem Phys; 2006 Jun; 124(21):214903. PubMed ID: 16774438
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Efficient stochastic thermostatting of path integral molecular dynamics.
    Ceriotti M; Parrinello M; Markland TE; Manolopoulos DE
    J Chem Phys; 2010 Sep; 133(12):124104. PubMed ID: 20886921
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Numerical examination of the extended phase-space volume-preserving integrator by the Nosé-Hoover molecular dynamics equations.
    Queyroy S; Nakamura H; Fukuda I
    J Comput Chem; 2009 Sep; 30(12):1799-815. PubMed ID: 19090566
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Data-driven molecular modeling with the generalized Langevin equation.
    Grogan F; Lei H; Li X; Baker NA
    J Comput Phys; 2020 Oct; 418():. PubMed ID: 32952214
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Global Langevin model of multidimensional biomolecular dynamics.
    Schaudinnus N; Lickert B; Biswas M; Stock G
    J Chem Phys; 2016 Nov; 145(18):184114. PubMed ID: 27846702
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Application of classical simulations for the computation of vibrational properties of free molecules.
    Tikhonov DS; Sharapa DI; Schwabedissen J; Rybkin VV
    Phys Chem Chem Phys; 2016 Oct; 18(40):28325-28338. PubMed ID: 27722605
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Multidimensional virtual-system coupled canonical molecular dynamics to compute free-energy landscapes of peptide multimer assembly.
    Hayami T; Higo J; Nakamura H; Kasahara K
    J Comput Chem; 2019 Oct; 40(28):2453-2463. PubMed ID: 31282023
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Derivation of the generalized Langevin equation in nonstationary environments.
    Kawai S; Komatsuzaki T
    J Chem Phys; 2011 Mar; 134(11):114523. PubMed ID: 21428648
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Structural Fluctuation, Relaxation, and Folding of Protein: An Approach Based on the Combined Generalized Langevin and RISM/3D-RISM Theories.
    Hirata F
    Molecules; 2023 Oct; 28(21):. PubMed ID: 37959769
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Enhanced Sampling of Interdomain Motion Using Map-Restrained Langevin Dynamics and NMR: Application to Pin1.
    Bouchard JJ; Xia J; Case DA; Peng JW
    J Mol Biol; 2018 Jul; 430(14):2164-2180. PubMed ID: 29775635
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Dynamics of proton transfer and vibrational relaxation in dilute hydrofluoric acid.
    Joutsuka T; Ando K
    J Phys Chem A; 2011 Feb; 115(5):678-84. PubMed ID: 21210667
    [TBL] [Abstract][Full Text] [Related]  

  • 33. On the environmental modes for the generalized Langevin equation.
    Kawai S
    J Chem Phys; 2015 Sep; 143(9):094101. PubMed ID: 26342353
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Mori-Zwanzig projection operator formalism: Particle-based coarse-grained dynamics of open classical systems far from equilibrium.
    Izvekov S
    Phys Rev E; 2021 Aug; 104(2-1):024121. PubMed ID: 34525637
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Girsanov reweighting for metadynamics simulations.
    Donati L; Keller BG
    J Chem Phys; 2018 Aug; 149(7):072335. PubMed ID: 30134671
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Multidimensional Langevin modeling of biomolecular dynamics.
    Hegger R; Stock G
    J Chem Phys; 2009 Jan; 130(3):034106. PubMed ID: 19173509
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Simultaneous escaping of explicit and hidden free energy barriers: application of the orthogonal space random walk strategy in generalized ensemble based conformational sampling.
    Zheng L; Chen M; Yang W
    J Chem Phys; 2009 Jun; 130(23):234105. PubMed ID: 19548709
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Leap-dynamics: efficient sampling of conformational space of proteins and peptides in solution.
    Kleinjung J; Bayley P; Fraternali F
    FEBS Lett; 2000 Mar; 470(3):257-62. PubMed ID: 10745078
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Determination of Structural Ensembles of Proteins: Restraining vs Reweighting.
    Rangan R; Bonomi M; Heller GT; Cesari A; Bussi G; Vendruscolo M
    J Chem Theory Comput; 2018 Dec; 14(12):6632-6641. PubMed ID: 30428663
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Enhanced sampling of molecular dynamics simulation of peptides and proteins by double coupling to thermal bath.
    Chen C; Huang Y; Xiao Y
    J Biomol Struct Dyn; 2013; 31(2):206-14. PubMed ID: 22830440
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.