230 related articles for article (PubMed ID: 26199375)
1. Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment.
Maddamsetti R; Hatcher PJ; Cruveiller S; Médigue C; Barrick JE; Lenski RE
Mol Biol Evol; 2015 Nov; 32(11):2897-904. PubMed ID: 26199375
[TBL] [Abstract][Full Text] [Related]
2. Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations.
Lenski RE; Winkworth CL; Riley MA
J Mol Evol; 2003 Apr; 56(4):498-508. PubMed ID: 12664169
[TBL] [Abstract][Full Text] [Related]
3. Genomic divergence of Escherichia coli strains: evidence for horizontal transfer and variation in mutation rates.
Elena SF; Whittam TS; Winkworth CL; Riley MA; Lenski RE
Int Microbiol; 2005 Dec; 8(4):271-8. PubMed ID: 16562379
[TBL] [Abstract][Full Text] [Related]
4. The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms.
Tiley GP; Burleigh JG
BMC Evol Biol; 2015 Sep; 15():194. PubMed ID: 26377000
[TBL] [Abstract][Full Text] [Related]
5. Low synonymous site variation at the lacY locus in Escherichia coli suggests the action of positive selection.
Wagner RR; Riley MA
J Mol Evol; 1996 Feb; 42(2):79-84. PubMed ID: 8919858
[TBL] [Abstract][Full Text] [Related]
6. Evolution of global regulatory networks during a long-term experiment with Escherichia coli.
Philippe N; Crozat E; Lenski RE; Schneider D
Bioessays; 2007 Sep; 29(9):846-60. PubMed ID: 17691099
[TBL] [Abstract][Full Text] [Related]
7. The distribution of fitness effects among synonymous mutations in a gene under directional selection.
Lebeuf-Taylor E; McCloskey N; Bailey SF; Hinz A; Kassen R
Elife; 2019 Jul; 8():. PubMed ID: 31322500
[TBL] [Abstract][Full Text] [Related]
8. Why are translationally sub-optimal synonymous codons used in Escherichia coli?
Smith NG; Eyre-Walker A
J Mol Evol; 2001 Sep; 53(3):225-36. PubMed ID: 11523009
[TBL] [Abstract][Full Text] [Related]
9. Gene flow in microbial communities could explain unexpected patterns of synonymous variation in the
Maddamsetti R
Mob Genet Elements; 2016; 6(1):e1137380. PubMed ID: 27066306
[TBL] [Abstract][Full Text] [Related]
10. Are Synonymous Substitutions in Flowering Plant Mitochondria Neutral?
Wynn EL; Christensen AC
J Mol Evol; 2015 Oct; 81(3-4):131-5. PubMed ID: 26458992
[TBL] [Abstract][Full Text] [Related]
11. Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila.
Comeron JM; Guthrie TB
Mol Biol Evol; 2005 Dec; 22(12):2519-30. PubMed ID: 16120803
[TBL] [Abstract][Full Text] [Related]
12. Divergent Evolution of Mutation Rates and Biases in the Long-Term Evolution Experiment with Escherichia coli.
Maddamsetti R; Grant NA
Genome Biol Evol; 2020 Sep; 12(9):1591-1603. PubMed ID: 32853353
[TBL] [Abstract][Full Text] [Related]
13. Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences.
Seo TK; Kishino H; Thorne JL
Mol Biol Evol; 2004 Jul; 21(7):1201-13. PubMed ID: 15014159
[TBL] [Abstract][Full Text] [Related]
14. Hierarchical clustering of genetic diversity associated to different levels of mutation and recombination in Escherichia coli: a study based on Mexican isolates.
González-González A; Sánchez-Reyes LL; Delgado Sapien G; Eguiarte LE; Souza V
Infect Genet Evol; 2013 Jan; 13():187-97. PubMed ID: 22995280
[TBL] [Abstract][Full Text] [Related]
15. Evolution of a Dominant Natural Isolate of Escherichia coli in the Human Gut over the Course of a Year Suggests a Neutral Evolution with Reduced Effective Population Size.
Ghalayini M; Launay A; Bridier-Nahmias A; Clermont O; Denamur E; Lescat M; Tenaillon O
Appl Environ Microbiol; 2018 Mar; 84(6):. PubMed ID: 29305507
[No Abstract] [Full Text] [Related]
16. Does experimental evolution reflect patterns in natural populations? E. coli strains from long-term studies compared with wild isolates.
Souza V; Travisano M; Turner PE; Eguiarte LE
Antonie Van Leeuwenhoek; 2002 Aug; 81(1-4):143-53. PubMed ID: 12448713
[TBL] [Abstract][Full Text] [Related]
17. DNA sequence evolution: the sounds of silence.
Sharp PM; Averof M; Lloyd AT; Matassi G; Peden JF
Philos Trans R Soc Lond B Biol Sci; 1995 Sep; 349(1329):241-7. PubMed ID: 8577834
[TBL] [Abstract][Full Text] [Related]
18. Recent gene conversions between duplicated glutamate decarboxylase genes (gadA and gadB) in pathogenic Escherichia coli.
Bergholz TM; Tarr CL; Christensen LM; Betting DJ; Whittam TS
Mol Biol Evol; 2007 Oct; 24(10):2323-33. PubMed ID: 17675652
[TBL] [Abstract][Full Text] [Related]
19. Mutator genomes decay, despite sustained fitness gains, in a long-term experiment with bacteria.
Couce A; Caudwell LV; Feinauer C; Hindré T; Feugeas JP; Weigt M; Lenski RE; Schneider D; Tenaillon O
Proc Natl Acad Sci U S A; 2017 Oct; 114(43):E9026-E9035. PubMed ID: 29073099
[TBL] [Abstract][Full Text] [Related]
20. Transcription-related mutations and GC content drive variation in nucleotide substitution rates across the genomes of Arabidopsis thaliana and Arabidopsis lyrata.
DeRose-Wilson LJ; Gaut BS
BMC Evol Biol; 2007 Apr; 7():66. PubMed ID: 17451608
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]