These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

208 related articles for article (PubMed ID: 26223446)

  • 1. Evaluating whole transcriptome amplification for gene profiling experiments using RNA-Seq.
    Faherty SL; Campbell CR; Larsen PA; Yoder AD
    BMC Biotechnol; 2015 Jul; 15():65. PubMed ID: 26223446
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison between NuGEN's WT-Ovation Pico and one-direct amplification systems.
    Morse AM; Carballo V; Baldwin DA; Taylor CG; McIntyre LM
    J Biomol Tech; 2010 Sep; 21(3):141-7. PubMed ID: 20808643
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing.
    Kawaji H; Lizio M; Itoh M; Kanamori-Katayama M; Kaiho A; Nishiyori-Sueki H; Shin JW; Kojima-Ishiyama M; Kawano M; Murata M; Ninomiya-Fukuda N; Ishikawa-Kato S; Nagao-Sato S; Noma S; Hayashizaki Y; Forrest AR; Carninci P;
    Genome Res; 2014 Apr; 24(4):708-17. PubMed ID: 24676093
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Fidelity and representativeness of two isothermal multiple displacement amplification systems to preamplify limiting amounts of total RNA.
    Gadkar VJ; Arseneault T; Filion M
    Mol Biotechnol; 2014 Apr; 56(4):377-85. PubMed ID: 24198216
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RNA-seq Sample Preparation Kits Strongly Affect Transcriptome Profiles of a Gas-Fermenting Bacterium.
    de Lima LA; Reinmets K; Nielsen LK; Marcellin E; Harris A; Köpke M; Valgepea K
    Microbiol Spectr; 2022 Aug; 10(4):e0230322. PubMed ID: 35894617
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparative analysis of RNA sequencing methods for degraded or low-input samples.
    Adiconis X; Borges-Rivera D; Satija R; DeLuca DS; Busby MA; Berlin AM; Sivachenko A; Thompson DA; Wysoker A; Fennell T; Gnirke A; Pochet N; Regev A; Levin JZ
    Nat Methods; 2013 Jul; 10(7):623-9. PubMed ID: 23685885
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
    Johnson BK; Scholz MB; Teal TK; Abramovitch RB
    BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Enriching and Characterizing T Cell Repertoires from 3' Barcoded Single-Cell Whole Transcriptome Amplification Products.
    Jivanjee T; Ibrahim S; Nyquist SK; Gatter GJ; Bromley JD; Jaiswal S; Berger B; Behar SM; Love JC; Shalek AK
    Methods Mol Biol; 2022; 2574():159-182. PubMed ID: 36087201
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Single read and paired end mRNA-Seq Illumina libraries from 10 nanograms total RNA.
    Sengupta S; Bolin JM; Ruotti V; Nguyen BK; Thomson JA; Elwell AL; Stewart R
    J Vis Exp; 2011 Oct; (56):e3340. PubMed ID: 22064688
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A comparative analysis of library prep approaches for sequencing low input translatome samples.
    Song Y; Milon B; Ott S; Zhao X; Sadzewicz L; Shetty A; Boger ET; Tallon LJ; Morell RJ; Mahurkar A; Hertzano R
    BMC Genomics; 2018 Sep; 19(1):696. PubMed ID: 30241496
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Using RNentropy to Detect Significant Variation in Gene Expression Across Multiple RNA-Seq or Single-Cell RNA-Seq Samples.
    Zambelli F; Pavesi G
    Methods Mol Biol; 2021; 2284():77-96. PubMed ID: 33835439
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A comparison between whole transcript and 3' RNA sequencing methods using Kapa and Lexogen library preparation methods.
    Ma F; Fuqua BK; Hasin Y; Yukhtman C; Vulpe CD; Lusis AJ; Pellegrini M
    BMC Genomics; 2019 Jan; 20(1):9. PubMed ID: 30616562
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
    Liu S; Zhang Y; Zhou Z; Waldbieser G; Sun F; Lu J; Zhang J; Jiang Y; Zhang H; Wang X; Rajendran KV; Khoo L; Kucuktas H; Peatman E; Liu Z
    BMC Genomics; 2012 Nov; 13():595. PubMed ID: 23127152
    [TBL] [Abstract][Full Text] [Related]  

  • 14. FDM: a graph-based statistical method to detect differential transcription using RNA-seq data.
    Singh D; Orellana CF; Hu Y; Jones CD; Liu Y; Chiang DY; Liu J; Prins JF
    Bioinformatics; 2011 Oct; 27(19):2633-40. PubMed ID: 21824971
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transcriptome Sequencing: RNA-Seq.
    Zhang H; He L; Cai L
    Methods Mol Biol; 2018; 1754():15-27. PubMed ID: 29536435
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Bias and Correction in RNA-seq Data for Marine Species.
    Song K; Li L; Zhang G
    Mar Biotechnol (NY); 2017 Oct; 19(5):541-550. PubMed ID: 28884399
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Systematic evaluation of RNA-Seq preparation protocol performance.
    Chao HP; Chen Y; Takata Y; Tomida MW; Lin K; Kirk JS; Simper MS; Mikulec CD; Rundhaug JE; Fischer SM; Chen T; Tang DG; Lu Y; Shen J
    BMC Genomics; 2019 Jul; 20(1):571. PubMed ID: 31296163
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Next-generation sequencing facilitates quantitative analysis of wild-type and Nrl(-/-) retinal transcriptomes.
    Brooks MJ; Rajasimha HK; Roger JE; Swaroop A
    Mol Vis; 2011; 17():3034-54. PubMed ID: 22162623
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol.
    Sun Z; Asmann YW; Nair A; Zhang Y; Wang L; Kalari KR; Bhagwate AV; Baker TR; Carr JM; Kocher JP; Perez EA; Thompson EA
    PLoS One; 2013; 8(8):e71745. PubMed ID: 23977132
    [TBL] [Abstract][Full Text] [Related]  

  • 20. RNA Amplification Protocol Leads to Biased Polymerase Chain Reaction Results Especially for Low-Copy Transcripts of Human Bone Marrow-Derived Stromal Cells.
    Coenen C; Liedtke S; Kogler G
    PLoS One; 2015; 10(10):e0141070. PubMed ID: 26485654
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.