These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

247 related articles for article (PubMed ID: 26237516)

  • 1. High-throughput determination of RNA structure by proximity ligation.
    Ramani V; Qiu R; Shendure J
    Nat Biotechnol; 2015 Sep; 33(9):980-4. PubMed ID: 26237516
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RNA structure from deep sequencing.
    Westhof E
    Nat Biotechnol; 2015 Sep; 33(9):928-9. PubMed ID: 26348961
    [No Abstract]   [Full Text] [Related]  

  • 3. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():290-9. PubMed ID: 16448022
    [TBL] [Abstract][Full Text] [Related]  

  • 4. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Xu X; Ji Y; Stormo GD
    Bioinformatics; 2007 Aug; 23(15):1883-91. PubMed ID: 17537756
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Ensemble-based RNA secondary structure characterization.
    Crozier SP; Garner HR
    IEEE Eng Med Biol Mag; 2007; 26(1):72-86. PubMed ID: 17278775
    [No Abstract]   [Full Text] [Related]  

  • 6. Genome-Wide Probing of RNA Structures In Vitro Using Nucleases and Deep Sequencing.
    Wan Y; Qu K; Ouyang Z; Chang HY
    Methods Mol Biol; 2016; 1361():141-60. PubMed ID: 26483021
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A new distance for high level RNA secondary structure comparison.
    Allali J; Sagot MF
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(1):3-14. PubMed ID: 17044160
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SimulFold: simultaneously inferring RNA structures including pseudoknots, alignments, and trees using a Bayesian MCMC framework.
    Meyer IM; Miklós I
    PLoS Comput Biol; 2007 Aug; 3(8):e149. PubMed ID: 17696604
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RNA structure alignment by a unit-vector approach.
    Capriotti E; Marti-Renom MA
    Bioinformatics; 2008 Aug; 24(16):i112-8. PubMed ID: 18689811
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Near-optimal probabilistic RNA-seq quantification.
    Bray NL; Pimentel H; Melsted P; Pachter L
    Nat Biotechnol; 2016 May; 34(5):525-7. PubMed ID: 27043002
    [TBL] [Abstract][Full Text] [Related]  

  • 11. RNA secondary structure analysis using the Vienna RNA package.
    Hofacker IL
    Curr Protoc Bioinformatics; 2004 Feb; Chapter 12():Unit 12.2. PubMed ID: 18428716
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ARTS: alignment of RNA tertiary structures.
    Dror O; Nussinov R; Wolfson H
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii47-53. PubMed ID: 16204124
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Biochemistry: cut and paste for RNA structure.
    Strack R
    Nat Methods; 2015 Oct; 12(10):906-7. PubMed ID: 26688884
    [No Abstract]   [Full Text] [Related]  

  • 14. A max-margin model for efficient simultaneous alignment and folding of RNA sequences.
    Do CB; Foo CS; Batzoglou S
    Bioinformatics; 2008 Jul; 24(13):i68-76. PubMed ID: 18586747
    [TBL] [Abstract][Full Text] [Related]  

  • 15. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
    Busch A; Backofen R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Bioinformatics; 2005 Jun; 21(11):2611-7. PubMed ID: 15784748
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Reduction of non-insert sequence reads by dimer eliminator LNA oligonucleotide for small RNA deep sequencing.
    Kawano M; Kawazu C; Lizio M; Kawaji H; Carninci P; Suzuki H; Hayashizaki Y
    Biotechniques; 2010 Oct; 49(4):751-5. PubMed ID: 20964636
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A rule-based approach for RNA pseudoknot prediction.
    Fu XZ; Wang H; Harrison RW; Harrison WL
    Int J Data Min Bioinform; 2008; 2(1):78-93. PubMed ID: 18399329
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A classifier system for predicting RNA secondary structure.
    Aldwairi M; Al-Hajasad B; Khamayseh Y
    Int J Bioinform Res Appl; 2014; 10(3):307-20. PubMed ID: 24794072
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Predicting the secondary structure common to two RNA sequences with Dynalign.
    Mathews D
    Curr Protoc Bioinformatics; 2004 Dec; Chapter 12():Unit 12.4. PubMed ID: 18428718
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.