These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
149 related articles for article (PubMed ID: 26240406)
1. Deep Mutational Scanning: Calculating Enrichment Scores for Protein Variants from DNA Sequencing Output Files. Starita LM; Fields S Cold Spring Harb Protoc; 2015 Aug; 2015(8):781-3. PubMed ID: 26240406 [TBL] [Abstract][Full Text] [Related]
2. Deep Mutational Scanning: Library Construction, Functional Selection, and High-Throughput Sequencing. Starita LM; Fields S Cold Spring Harb Protoc; 2015 Aug; 2015(8):777-80. PubMed ID: 26240405 [TBL] [Abstract][Full Text] [Related]
3. Deep Mutational Scanning: A Highly Parallel Method to Measure the Effects of Mutation on Protein Function. Starita LM; Fields S Cold Spring Harb Protoc; 2015 Aug; 2015(8):711-4. PubMed ID: 26240414 [TBL] [Abstract][Full Text] [Related]
4. Software for the analysis and visualization of deep mutational scanning data. Bloom JD BMC Bioinformatics; 2015 May; 16():168. PubMed ID: 25990960 [TBL] [Abstract][Full Text] [Related]
5. Robust in vitro affinity maturation strategy based on interface-focused high-throughput mutational scanning. Fujino Y; Fujita R; Wada K; Fujishige K; Kanamori T; Hunt L; Shimizu Y; Ueda T Biochem Biophys Res Commun; 2012 Nov; 428(3):395-400. PubMed ID: 23103372 [TBL] [Abstract][Full Text] [Related]
6. mirTrios: an integrated pipeline for detection of de novo and rare inherited mutations from trios-based next-generation sequencing. Li J; Jiang Y; Wang T; Chen H; Xie Q; Shao Q; Ran X; Xia K; Sun ZS; Wu J J Med Genet; 2015 Apr; 52(4):275-81. PubMed ID: 25596308 [TBL] [Abstract][Full Text] [Related]
7. AmpliVar: mutation detection in high-throughput sequence from amplicon-based libraries. Hsu AL; Kondrashova O; Lunke S; Love CJ; Meldrum C; Marquis-Nicholson R; Corboy G; Pham K; Wakefield M; Waring PM; Taylor GR Hum Mutat; 2015 Apr; 36(4):411-8. PubMed ID: 25664426 [TBL] [Abstract][Full Text] [Related]
8. Predicting mutant outcome by combining deep mutational scanning and machine learning. Sarfati H; Naftaly S; Papo N; Keasar C Proteins; 2022 Jan; 90(1):45-57. PubMed ID: 34293212 [TBL] [Abstract][Full Text] [Related]
9. Measuring the activity of protein variants on a large scale using deep mutational scanning. Fowler DM; Stephany JJ; Fields S Nat Protoc; 2014 Sep; 9(9):2267-84. PubMed ID: 25167058 [TBL] [Abstract][Full Text] [Related]
10. Tilling by sequencing. Tsai H; Ngo K; Lieberman M; Missirian V; Comai L Methods Mol Biol; 2015; 1284():359-80. PubMed ID: 25757782 [TBL] [Abstract][Full Text] [Related]
11. Enrich: software for analysis of protein function by enrichment and depletion of variants. Fowler DM; Araya CL; Gerard W; Fields S Bioinformatics; 2011 Dec; 27(24):3430-1. PubMed ID: 22006916 [TBL] [Abstract][Full Text] [Related]
12. Massive parallel amplicon sequencing of the breast cancer genes BRCA1 and BRCA2: opportunities, challenges, and limitations. De Leeneer K; Hellemans J; De Schrijver J; Baetens M; Poppe B; Van Criekinge W; De Paepe A; Coucke P; Claes K Hum Mutat; 2011 Mar; 32(3):335-44. PubMed ID: 21305653 [TBL] [Abstract][Full Text] [Related]
13. Rational Protein Engineering Guided by Deep Mutational Scanning. Shin H; Cho BK Int J Mol Sci; 2015 Sep; 16(9):23094-110. PubMed ID: 26404267 [TBL] [Abstract][Full Text] [Related]
14. DiMSum: an error model and pipeline for analyzing deep mutational scanning data and diagnosing common experimental pathologies. Faure AJ; Schmiedel JM; Baeza-Centurion P; Lehner B Genome Biol; 2020 Aug; 21(1):207. PubMed ID: 32799905 [TBL] [Abstract][Full Text] [Related]
15. An introduction to high-throughput sequencing experiments: design and bioinformatics analysis. Normand R; Yanai I Methods Mol Biol; 2013; 1038():1-26. PubMed ID: 23872966 [TBL] [Abstract][Full Text] [Related]
16. Global optimization of somatic variant identification in cancer genomes with a global community challenge. Boutros PC; Ewing AD; Ellrott K; Norman TC; Dang KK; Hu Y; Kellen MR; Suver C; Bare JC; Stein LD; Spellman PT; Stolovitzky G; Friend SH; Margolin AA; Stuart JM Nat Genet; 2014 Apr; 46(4):318-319. PubMed ID: 24675517 [No Abstract] [Full Text] [Related]
17. High-Throughput, Amplicon-Based Sequencing of the CREBBP Gene as a Tool to Develop a Universal Platform-Independent Assay. Fuellgrabe MW; Herrmann D; Knecht H; Kuenzel S; Kneba M; Pott C; Brüggemann M PLoS One; 2015; 10(6):e0129195. PubMed ID: 26057250 [TBL] [Abstract][Full Text] [Related]
18. Clinical validation of targeted next-generation sequencing for inherited disorders. Yohe S; Hauge A; Bunjer K; Kemmer T; Bower M; Schomaker M; Onsongo G; Wilson J; Erdmann J; Zhou Y; Deshpande A; Spears MD; Beckman K; Silverstein KA; Thyagarajan B Arch Pathol Lab Med; 2015 Feb; 139(2):204-10. PubMed ID: 25611102 [TBL] [Abstract][Full Text] [Related]