245 related articles for article (PubMed ID: 26253974)
1. Pseudouridine Chemical Labeling and Profiling.
Li X; Ma S; Yi C
Methods Enzymol; 2015; 560():247-72. PubMed ID: 26253974
[TBL] [Abstract][Full Text] [Related]
2. Pseudouridylation meets next-generation sequencing.
Zaringhalam M; Papavasiliou FN
Methods; 2016 Sep; 107():63-72. PubMed ID: 26968262
[TBL] [Abstract][Full Text] [Related]
3. Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome.
Li X; Zhu P; Ma S; Song J; Bai J; Sun F; Yi C
Nat Chem Biol; 2015 Aug; 11(8):592-7. PubMed ID: 26075521
[TBL] [Abstract][Full Text] [Related]
4. Pseudo-Seq: Genome-Wide Detection of Pseudouridine Modifications in RNA.
Carlile TM; Rojas-Duran MF; Gilbert WV
Methods Enzymol; 2015; 560():219-45. PubMed ID: 26253973
[TBL] [Abstract][Full Text] [Related]
5. Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiae.
Lovejoy AF; Riordan DP; Brown PO
PLoS One; 2014; 9(10):e110799. PubMed ID: 25353621
[TBL] [Abstract][Full Text] [Related]
6. Quantitative profiling of pseudouridylation landscape in the human transcriptome.
Zhang M; Jiang Z; Ma Y; Liu W; Zhuang Y; Lu B; Li K; Peng J; Yi C
Nat Chem Biol; 2023 Oct; 19(10):1185-1195. PubMed ID: 36997645
[TBL] [Abstract][Full Text] [Related]
7. Probing RNA Modification Status at Single-Nucleotide Resolution in Total RNA.
Liu N; Pan T
Methods Enzymol; 2015; 560():149-59. PubMed ID: 26253970
[TBL] [Abstract][Full Text] [Related]
8. Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling.
Huang S; Zhang W; Katanski CD; Dersh D; Dai Q; Lolans K; Yewdell J; Eren AM; Pan T
Genome Biol; 2021 Dec; 22(1):330. PubMed ID: 34872593
[TBL] [Abstract][Full Text] [Related]
9. Pseudouridine in mRNA: Incorporation, Detection, and Recoding.
Wu G; Huang C; Yu YT
Methods Enzymol; 2015; 560():187-217. PubMed ID: 26253972
[TBL] [Abstract][Full Text] [Related]
10. Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells.
Carlile TM; Rojas-Duran MF; Zinshteyn B; Shin H; Bartoli KM; Gilbert WV
Nature; 2014 Nov; 515(7525):143-6. PubMed ID: 25192136
[TBL] [Abstract][Full Text] [Related]
11. Transcriptome-wide analysis of pseudouridylation in Drosophila melanogaster.
Song W; Podicheti R; Rusch DB; Tracey WD
G3 (Bethesda); 2023 Mar; 13(3):. PubMed ID: 36534986
[TBL] [Abstract][Full Text] [Related]
12. BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution.
Zhang LS; Ye C; Ju CW; Gao B; Feng X; Sun HL; Wei J; Yang F; Dai Q; He C
Nat Protoc; 2024 Feb; 19(2):517-538. PubMed ID: 37968414
[TBL] [Abstract][Full Text] [Related]
13. Pseudouridine site assignment by high-throughput in vitro RNA pseudouridylation and sequencing.
Martinez NM; Schaening-Burgos C; Gilbert WV
Methods Enzymol; 2021; 658():277-310. PubMed ID: 34517951
[TBL] [Abstract][Full Text] [Related]
14. Investigating Pseudouridylation Mechanisms by High-Throughput in Vitro RNA Pseudouridylation and Sequencing.
Martinez NM; Gilbert WV
Methods Mol Biol; 2021; 2298():379-397. PubMed ID: 34085256
[TBL] [Abstract][Full Text] [Related]
15. Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution.
Dai Q; Zhang LS; Sun HL; Pajdzik K; Yang L; Ye C; Ju CW; Liu S; Wang Y; Zheng Z; Zhang L; Harada BT; Dou X; Irkliyenko I; Feng X; Zhang W; Pan T; He C
Nat Biotechnol; 2023 Mar; 41(3):344-354. PubMed ID: 36302989
[TBL] [Abstract][Full Text] [Related]
16. mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA.
Sas-Chen A; Nir R; Schwartz S
Methods Mol Biol; 2021; 2192():103-115. PubMed ID: 33230769
[TBL] [Abstract][Full Text] [Related]
17. Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing.
Begik O; Lucas MC; Pryszcz LP; Ramirez JM; Medina R; Milenkovic I; Cruciani S; Liu H; Vieira HGS; Sas-Chen A; Mattick JS; Schwartz S; Novoa EM
Nat Biotechnol; 2021 Oct; 39(10):1278-1291. PubMed ID: 33986546
[TBL] [Abstract][Full Text] [Related]
18. Transcriptome-Wide Identification of Pseudouridine Modifications Using Pseudo-seq.
Carlile TM; Rojas-Duran MF; Gilbert WV
Curr Protoc Mol Biol; 2015 Oct; 112():4.25.1-4.25.24. PubMed ID: 26423590
[TBL] [Abstract][Full Text] [Related]
19. mRNA pseudouridylation affects RNA metabolism in the parasite
Nakamoto MA; Lovejoy AF; Cygan AM; Boothroyd JC
RNA; 2017 Dec; 23(12):1834-1849. PubMed ID: 28851751
[TBL] [Abstract][Full Text] [Related]
20. Quantitative base-resolution sequencing technology for mapping pseudouridines in mammalian mRNA.
Zhang LS; Dai Q; He C
Methods Enzymol; 2023; 692():23-38. PubMed ID: 37925181
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]