These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

236 related articles for article (PubMed ID: 26262860)

  • 1. Transition-Path Probability as a Test of Reaction-Coordinate Quality Reveals DNA Hairpin Folding Is a One-Dimensional Diffusive Process.
    Neupane K; Manuel AP; Lambert J; Woodside MT
    J Phys Chem Lett; 2015 Mar; 6(6):1005-10. PubMed ID: 26262860
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reconstructing folding energy landscapes from splitting probability analysis of single-molecule trajectories.
    Manuel AP; Lambert J; Woodside MT
    Proc Natl Acad Sci U S A; 2015 Jun; 112(23):7183-8. PubMed ID: 26039984
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Measuring the average shape of transition paths during the folding of a single biological molecule.
    Hoffer NQ; Neupane K; Pyo AGT; Woodside MT
    Proc Natl Acad Sci U S A; 2019 Apr; 116(17):8125-8130. PubMed ID: 30952784
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Direct measurement of sequence-dependent transition path times and conformational diffusion in DNA duplex formation.
    Neupane K; Wang F; Woodside MT
    Proc Natl Acad Sci U S A; 2017 Feb; 114(6):1329-1334. PubMed ID: 28115714
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Testing Kinetic Identities Involving Transition-Path Properties Using Single-Molecule Folding Trajectories.
    Neupane K; Hoffer NQ; Woodside MT
    J Phys Chem B; 2018 Dec; 122(49):11095-11099. PubMed ID: 30004229
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and rates.
    Yu H; Gupta AN; Liu X; Neupane K; Brigley AM; Sosova I; Woodside MT
    Proc Natl Acad Sci U S A; 2012 Sep; 109(36):14452-7. PubMed ID: 22908253
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Probing Position-Dependent Diffusion in Folding Reactions Using Single-Molecule Force Spectroscopy.
    Foster DAN; Petrosyan R; Pyo AGT; Hoffmann A; Wang F; Woodside MT
    Biophys J; 2018 Apr; 114(7):1657-1666. PubMed ID: 29642035
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Measuring the folding landscape of a harmonically constrained biopolymer.
    de Messieres M; Brawn-Cinani B; La Porta A
    Biophys J; 2011 Jun; 100(11):2736-44. PubMed ID: 21641319
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Detailed study of DNA hairpin dynamics using single-molecule fluorescence assisted by DNA origami.
    Tsukanov R; Tomov TE; Masoud R; Drory H; Plavner N; Liber M; Nir E
    J Phys Chem B; 2013 Oct; 117(40):11932-42. PubMed ID: 24041226
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Testing Landscape Theory for Biomolecular Processes with Single Molecule Fluorescence Spectroscopy.
    Truex K; Chung HS; Louis JM; Eaton WA
    Phys Rev Lett; 2015 Jul; 115(1):018101. PubMed ID: 26182121
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Fep1d: a script for the analysis of reaction coordinates.
    Banushkina PV; Krivov SV
    J Comput Chem; 2015 May; 36(12):878-82. PubMed ID: 25716583
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Broad distributions of transition-path times are fingerprints of multidimensionality of the underlying free energy landscapes.
    Satija R; Berezhkovskii AM; Makarov DE
    Proc Natl Acad Sci U S A; 2020 Nov; 117(44):27116-27123. PubMed ID: 33087575
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Direct observation of transition paths during the folding of proteins and nucleic acids.
    Neupane K; Foster DA; Dee DR; Yu H; Wang F; Woodside MT
    Science; 2016 Apr; 352(6282):239-42. PubMed ID: 27124461
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Coordinate and time-dependent diffusion dynamics in protein folding.
    Oliveira RJ; Whitford PC; Chahine J; Leite VB; Wang J
    Methods; 2010 Sep; 52(1):91-8. PubMed ID: 20438841
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transition path times for nucleic Acid folding determined from energy-landscape analysis of single-molecule trajectories.
    Neupane K; Ritchie DB; Yu H; Foster DA; Wang F; Woodside MT
    Phys Rev Lett; 2012 Aug; 109(6):068102. PubMed ID: 23006308
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Force-Dependent Folding and Unfolding Kinetics in DNA Hairpins Reveals Transition-State Displacements along a Single Pathway.
    Alemany A; Ritort F
    J Phys Chem Lett; 2017 Mar; 8(5):895-900. PubMed ID: 28150950
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Direct Observation of Folding Energy Landscape of RNA Hairpin at Mechanical Loading Rates.
    Xu H; Plaut B; Zhu X; Chen M; Mavinkurve U; Maiti A; Song G; Murari K; Mandal M
    J Phys Chem B; 2017 Mar; 121(10):2220-2229. PubMed ID: 28248503
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Quantify the combined effects of temperature and force on the stability of DNA hairpin.
    Li L; Wang H; Xiong C; Luo D; Chen H; Liu Y
    J Phys Condens Matter; 2021 Apr; 33(18):. PubMed ID: 33711825
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Memory effects in single-molecule force spectroscopy measurements of biomolecular folding.
    Pyo AGT; Woodside MT
    Phys Chem Chem Phys; 2019 Nov; 21(44):24527-24534. PubMed ID: 31663550
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Accurate Protein-Folding Transition-Path Statistics from a Simple Free-Energy Landscape.
    Jacobs WM; Shakhnovich EI
    J Phys Chem B; 2018 Dec; 122(49):11126-11136. PubMed ID: 30091592
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.