BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

280 related articles for article (PubMed ID: 26264042)

  • 1. Cilantro microbiome before and after nonselective pre-enrichment for Salmonella using 16S rRNA and metagenomic sequencing.
    Jarvis KG; White JR; Grim CJ; Ewing L; Ottesen AR; Beaubrun JJ; Pettengill JB; Brown E; Hanes DE
    BMC Microbiol; 2015 Aug; 15():160. PubMed ID: 26264042
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of a PCR serotyping assay, Check&Trace assay for Salmonella, and Luminex Salmonella serotyping assay for the characterization of Salmonella enterica identified from fresh and naturally contaminated cilantro.
    Jean-Gilles Beaubrun J; Ewing L; Jarvis K; Dudley K; Grim C; Gopinath G; Flamer ML; Auguste W; Jayaram A; Elmore J; Lamont M; McGrath T; Hanes DE
    Food Microbiol; 2014 Sep; 42():181-7. PubMed ID: 24929735
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Development of a custom 16S rRNA gene library for the identification and molecular subtyping of Salmonella enterica.
    Hellberg RS; Haney CJ; Shen Y; Cheng CM; Williams-Hill DM; Martin WB
    J Microbiol Methods; 2012 Dec; 91(3):448-58. PubMed ID: 23022443
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mungo bean sprout microbiome and changes associated with culture based enrichment protocols used in detection of Gram-negative foodborne pathogens.
    Margot H; Stephan R; Tasara T
    Microbiome; 2016 Sep; 4(1):48. PubMed ID: 27600392
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis of microbiome in raw chicken meat from butcher shops and packaged products in South Korea to detect the potential risk of foodborne illness.
    Kim HE; Lee JJ; Lee MJ; Kim BS
    Food Res Int; 2019 Aug; 122():517-527. PubMed ID: 31229107
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison Between Full-Length 16S rRNA Metabarcoding and Whole Metagenome Sequencing Suggests the Use of Either Is Suitable for Large-Scale Microbiome Studies.
    Rubiola S; Macori G; Civera T; Fanning S; Mitchell M; Chiesa F
    Foodborne Pathog Dis; 2022 Jul; 19(7):495-504. PubMed ID: 35819265
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Serovar-level identification of bacterial foodborne pathogens from full-length 16S rRNA gene sequencing.
    Grinevich D; Harden L; Thakur S; Callahan B
    mSystems; 2024 Mar; 9(3):e0075723. PubMed ID: 38319092
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Host DNA depletion efficiency of microbiome DNA enrichment methods in infected tissue samples.
    Heravi FS; Zakrzewski M; Vickery K; Hu H
    J Microbiol Methods; 2020 Mar; 170():105856. PubMed ID: 32007505
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Phylogenetic relationship of Salmonella enterica strains in Tehran, Iran, using 16S rRNA and gyrB gene sequences.
    Tajbakhsh M; Nayer BN; Motavaze K; Kharaziha P; Chiani M; Zali MR; Klena JD
    J Infect Dev Ctries; 2011 Jul; 5(6):465-72. PubMed ID: 21727646
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization of the fecal microbiome in different swine groups by high-throughput sequencing.
    Park SJ; Kim J; Lee JS; Rhee SK; Kim H
    Anaerobe; 2014 Aug; 28():157-62. PubMed ID: 24954845
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Microbial community profiling of fresh basil and pitfalls in taxonomic assignment of enterobacterial pathogenic species based upon 16S rRNA amplicon sequencing.
    Ceuppens S; De Coninck D; Bottledoorn N; Van Nieuwerburgh F; Uyttendaele M
    Int J Food Microbiol; 2017 Sep; 257():148-156. PubMed ID: 28666129
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparative analysis of shotgun metagenomics and 16S rDNA sequencing of gut microbiota in migratory seagulls.
    Liao F; Xia Y; Gu W; Fu X; Yuan B
    PeerJ; 2023; 11():e16394. PubMed ID: 37941936
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Detection and isolation of low levels of E. coli O157:H7 in cilantro by real-time PCR, immunomagnetic separation, and cultural methods with and without an acid treatment.
    Yoshitomi KJ; Jinneman KC; Zapata R; Weagant SD; Fedio WM
    J Food Sci; 2012 Aug; 77(8):M481-9. PubMed ID: 22860597
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Development of a sigDE-based real-time reverse-transcriptase PCR for the detection of viable Salmonella enterica.
    Zhou M; Yang J; Zhou X; Liu B; Liu D; Yuan C; He Y; Pan L; Shi X
    Foodborne Pathog Dis; 2014 Jul; 11(7):537-44. PubMed ID: 24926645
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
    Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
    BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protocols for metagenomic DNA extraction and Illumina amplicon library preparation for faecal and swab samples.
    Vo AT; Jedlicka JA
    Mol Ecol Resour; 2014 Nov; 14(6):1183-97. PubMed ID: 24774752
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Enrichment dynamics of Listeria monocytogenes and the associated microbiome from naturally contaminated ice cream linked to a listeriosis outbreak.
    Ottesen A; Ramachandran P; Reed E; White JR; Hasan N; Subramanian P; Ryan G; Jarvis K; Grim C; Daquiqan N; Hanes D; Allard M; Colwell R; Brown E; Chen Y
    BMC Microbiol; 2016 Nov; 16(1):275. PubMed ID: 27852235
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
    Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
    J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
    Salamon D; Zapała B; Krawczyk A; Potasiewicz A; Nikiforuk A; Stój A; Gosiewski T
    Appl Microbiol Biotechnol; 2022 Nov; 106(22):7671-7681. PubMed ID: 36322250
    [TBL] [Abstract][Full Text] [Related]  

  • 20. First insights into the microbial diversity in the omasum and reticulum of bovine using Illumina sequencing.
    Peng S; Yin J; Liu X; Jia B; Chang Z; Lu H; Jiang N; Chen Q
    J Appl Genet; 2015 Aug; 56(3):393-401. PubMed ID: 25604266
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.