These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
92 related articles for article (PubMed ID: 26344157)
1. IChemPIC: A Random Forest Classifier of Biological and Crystallographic Protein-Protein Interfaces. Da Silva F; Desaphy J; Bret G; Rognan D J Chem Inf Model; 2015 Sep; 55(9):2005-14. PubMed ID: 26344157 [TBL] [Abstract][Full Text] [Related]
2. PPIDD: an extraction and visualisation method of biological protein-protein interfaces. Benoit V; Mucchielli-Giorgi MH; Dumont B; Durosay P; Reymond N; Delacroix H Biochimie; 2008 Apr; 90(4):640-7. PubMed ID: 18086573 [TBL] [Abstract][Full Text] [Related]
3. Statistical analysis and prediction of protein-protein interfaces. Bordner AJ; Abagyan R Proteins; 2005 Aug; 60(3):353-66. PubMed ID: 15906321 [TBL] [Abstract][Full Text] [Related]
4. Distinguishing crystallographic from biological interfaces in protein complexes: role of intermolecular contacts and energetics for classification. Elez K; Bonvin AMJJ; Vangone A BMC Bioinformatics; 2018 Nov; 19(Suppl 15):438. PubMed ID: 30497368 [TBL] [Abstract][Full Text] [Related]
5. CRK: an evolutionary approach for distinguishing biologically relevant interfaces from crystal contacts. Schärer MA; Grütter MG; Capitani G Proteins; 2010 Sep; 78(12):2707-13. PubMed ID: 20589644 [TBL] [Abstract][Full Text] [Related]
6. Mining the characteristic interaction patterns on protein-protein binding interfaces. Li Y; Liu Z; Han L; Li C; Wang R J Chem Inf Model; 2013 Sep; 53(9):2437-47. PubMed ID: 23930922 [TBL] [Abstract][Full Text] [Related]
7. Unintended consequences? Water molecules at biological and crystallographic protein-protein interfaces. Ahmed MH; Habtemariam M; Safo MK; Scarsdale JN; Spyrakis F; Cozzini P; Mozzarelli A; Kellogg GE Comput Biol Chem; 2013 Dec; 47():126-41. PubMed ID: 24076743 [TBL] [Abstract][Full Text] [Related]
9. Atomic analysis of protein-protein interfaces with known inhibitors: the 2P2I database. Bourgeas R; Basse MJ; Morelli X; Roche P PLoS One; 2010 Mar; 5(3):e9598. PubMed ID: 20231898 [TBL] [Abstract][Full Text] [Related]
10. Specificity of molecular interactions in transient protein-protein interaction interfaces. Cho KI; Lee K; Lee KH; Kim D; Lee D Proteins; 2006 Nov; 65(3):593-606. PubMed ID: 16948160 [TBL] [Abstract][Full Text] [Related]
11. Docking without docking: ISEARCH--prediction of interactions using known interfaces. Günther S; May P; Hoppe A; Frömmel C; Preissner R Proteins; 2007 Dec; 69(4):839-44. PubMed ID: 17803236 [TBL] [Abstract][Full Text] [Related]
12. The distribution of ligand-binding pockets around protein-protein interfaces suggests a general mechanism for pocket formation. Gao M; Skolnick J Proc Natl Acad Sci U S A; 2012 Mar; 109(10):3784-9. PubMed ID: 22355140 [TBL] [Abstract][Full Text] [Related]
14. Transient protein-protein interactions. Acuner Ozbabacan SE; Engin HB; Gursoy A; Keskin O Protein Eng Des Sel; 2011 Sep; 24(9):635-48. PubMed ID: 21676899 [TBL] [Abstract][Full Text] [Related]
16. Blind predictions of protein interfaces by docking calculations in CAPRI. Lensink MF; Wodak SJ Proteins; 2010 Nov; 78(15):3085-95. PubMed ID: 20839234 [TBL] [Abstract][Full Text] [Related]
17. Predicting protein-protein interaction specificity through the integration of three-dimensional structural information and the evolutionary record of protein domains. Panjkovich A; Aloy P Mol Biosyst; 2010 Apr; 6(4):741-9. PubMed ID: 20237652 [TBL] [Abstract][Full Text] [Related]