These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

405 related articles for article (PubMed ID: 26354429)

  • 1. Formaldehyde crosslinking: a tool for the study of chromatin complexes.
    Hoffman EA; Frey BL; Smith LM; Auble DT
    J Biol Chem; 2015 Oct; 290(44):26404-11. PubMed ID: 26354429
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Second-generation method for analysis of chromatin binding with formaldehyde-cross-linking kinetics.
    Zaidi H; Hoffman EA; Shetty SJ; Bekiranov S; Auble DT
    J Biol Chem; 2017 Nov; 292(47):19338-19355. PubMed ID: 28972159
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ChIP bias as a function of cross-linking time.
    Baranello L; Kouzine F; Sanford S; Levens D
    Chromosome Res; 2016 May; 24(2):175-81. PubMed ID: 26685864
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation.
    Orlando V
    Trends Biochem Sci; 2000 Mar; 25(3):99-104. PubMed ID: 10694875
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Chromatin Immunoprecipitation in Human and Yeast Cells.
    Lee JB; Keung AJ
    Methods Mol Biol; 2018; 1767():257-269. PubMed ID: 29524140
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Utility of formaldehyde cross-linking and mass spectrometry in the study of protein-protein interactions.
    Sutherland BW; Toews J; Kast J
    J Mass Spectrom; 2008 Jun; 43(6):699-715. PubMed ID: 18438963
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Characterization of protein-DNA association in vivo by chromatin immunoprecipitation.
    Kuras L
    Methods Mol Biol; 2004; 284():147-62. PubMed ID: 15173614
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Formaldehyde Cross-Linking.
    Kim TH; Dekker J
    Cold Spring Harb Protoc; 2018 Apr; 2018(4):. PubMed ID: 29610357
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Two-step cross-linking method for identification of NF-kappaB gene network by chromatin immunoprecipitation.
    Nowak DE; Tian B; Brasier AR
    Biotechniques; 2005 Nov; 39(5):715-25. PubMed ID: 16315372
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Fixated on fixation: using ChIP to interrogate the dynamics of chromatin interactions.
    Keren L; Segal E
    Genome Biol; 2013 Nov; 14(11):138. PubMed ID: 24257511
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Chromatin immunoprecipitation in mammalian cells.
    Svotelis A; GĂ©vry N; Gaudreau L
    Methods Mol Biol; 2009; 543():243-51. PubMed ID: 19378170
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Preparation of Cross-Linked Chromatin for ChIP.
    Kim TH; Dekker J
    Cold Spring Harb Protoc; 2018 Apr; 2018(4):. PubMed ID: 29610358
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions.
    Schmidt D; Wilson MD; Spyrou C; Brown GD; Hadfield J; Odom DT
    Methods; 2009 Jul; 48(3):240-8. PubMed ID: 19275939
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Analysis of chromatin binding dynamics using the crosslinking kinetics (CLK) method.
    Viswanathan R; Hoffman EA; Shetty SJ; Bekiranov S; Auble DT
    Methods; 2014 Dec; 70(2-3):97-107. PubMed ID: 25448301
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Formaldehyde-assisted isolation of regulatory elements.
    Nagy PL; Price DH
    Wiley Interdiscip Rev Syst Biol Med; 2009; 1(3):400-406. PubMed ID: 20046543
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Measuring chromatin interaction dynamics on the second time scale at single-copy genes.
    Poorey K; Viswanathan R; Carver MN; Karpova TS; Cirimotich SM; McNally JG; Bekiranov S; Auble DT
    Science; 2013 Oct; 342(6156):369-72. PubMed ID: 24091704
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sequential chromatin immunoprecipitation from animal tissues.
    Chaya D; Zaret KS
    Methods Enzymol; 2004; 376():361-72. PubMed ID: 14975318
    [No Abstract]   [Full Text] [Related]  

  • 18. An Improved Method for Measuring Chromatin-binding Dynamics Using Time-dependent Formaldehyde Crosslinking.
    Hoffman EA; Zaidi H; Shetty SJ; Bekiranov S; Auble DT
    Bio Protoc; 2018 Feb; 8(4):. PubMed ID: 29682595
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A new fractionation assay, based on the size of formaldehyde-crosslinked, mildly sheared chromatin, delineates the chromatin structure at promoter regions.
    Ishihara S; Varma R; Schwartz RH
    Nucleic Acids Res; 2010 Jun; 38(11):e124. PubMed ID: 20371521
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Optimization of formaldehyde cross-linking for protein interaction analysis of non-tagged integrin beta1.
    Klockenbusch C; Kast J
    J Biomed Biotechnol; 2010; 2010():927585. PubMed ID: 20634879
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.