119 related articles for article (PubMed ID: 26374425)
1. Hydrolysis of Guanosine Triphosphate (GTP) by the Ras·GAP Protein Complex: Reaction Mechanism and Kinetic Scheme.
Khrenova MG; Grigorenko BL; Kolomeisky AB; Nemukhin AV
J Phys Chem B; 2015 Oct; 119(40):12838-45. PubMed ID: 26374425
[TBL] [Abstract][Full Text] [Related]
2. Modeling the role of G12V and G13V Ras mutations in the Ras-GAP-catalyzed hydrolysis reaction of guanosine triphosphate.
Khrenova MG; Mironov VA; Grigorenko BL; Nemukhin AV
Biochemistry; 2014 Nov; 53(45):7093-9. PubMed ID: 25339142
[TBL] [Abstract][Full Text] [Related]
3. Mechanisms of guanosine triphosphate hydrolysis by Ras and Ras-GAP proteins as rationalized by ab initio QM/MM simulations.
Grigorenko BL; Nemukhin AV; Shadrina MS; Topol IA; Burt SK
Proteins; 2007 Feb; 66(2):456-66. PubMed ID: 17094109
[TBL] [Abstract][Full Text] [Related]
4. Theoretical vibrational spectroscopy of intermediates and the reaction mechanism of the guanosine triphosphate hydrolysis by the protein complex Ras-GAP.
Khrenova MG; Grigorenko BL; Nemukhin AV
Spectrochim Acta A Mol Biomol Spectrosc; 2016 Sep; 166():68-72. PubMed ID: 27214270
[TBL] [Abstract][Full Text] [Related]
5. Quantum chemical modeling of the GTP hydrolysis by the RAS-GAP protein complex.
Topol IA; Cachau RE; Nemukhin AV; Grigorenko BL; Burt SK
Biochim Biophys Acta; 2004 Jul; 1700(1):125-36. PubMed ID: 15210132
[TBL] [Abstract][Full Text] [Related]
6. Diversity of mechanisms in Ras-GAP catalysis of guanosine triphosphate hydrolysis revealed by molecular modeling.
Grigorenko BL; Kots ED; Nemukhin AV
Org Biomol Chem; 2019 May; 17(19):4879-4891. PubMed ID: 31041977
[TBL] [Abstract][Full Text] [Related]
7. Computational characterization of the chemical step in the GTP hydrolysis by Ras-GAP for the wild-type and G13V mutated Ras.
Mironov VA; Khrenova MG; Lychko LA; Nemukhin AV
Proteins; 2015 Jun; 83(6):1046-53. PubMed ID: 25820867
[TBL] [Abstract][Full Text] [Related]
8. Reaction Mechanism of Guanosine Triphosphate Hydrolysis by the Vision-Related Protein Complex Arl3-RP2.
Khrenova MG; Kots ED; Nemukhin AV
J Phys Chem B; 2016 Apr; 120(16):3873-9. PubMed ID: 27043216
[TBL] [Abstract][Full Text] [Related]
9. Mechanism of Guanosine Triphosphate Hydrolysis by the Visual Proteins Arl3-RP2: Free Energy Reaction Profiles Computed with Ab Initio Type QM/MM Potentials.
Khrenova MG; Bulavko ES; Mulashkin FD; Nemukhin AV
Molecules; 2021 Jun; 26(13):. PubMed ID: 34208932
[TBL] [Abstract][Full Text] [Related]
10. Why does mutation of Gln61 in Ras by the nitro analog NGln maintain activity of Ras-GAP in hydrolysis of guanosine triphosphate?
Khrenova MG; Grigorenko BL; Mironov VA; Nemukhin AV
Proteins; 2015 Nov; 83(11):2091-9. PubMed ID: 26370130
[TBL] [Abstract][Full Text] [Related]
11. QM/MM modeling the Ras-GAP catalyzed hydrolysis of guanosine triphosphate.
Grigorenko BL; Nemukhin AV; Topol IA; Cachau RE; Burt SK
Proteins; 2005 Aug; 60(3):495-503. PubMed ID: 15906320
[TBL] [Abstract][Full Text] [Related]
12. Real-time in vitro measurement of intrinsic and Ras GAP-mediated GTP hydrolysis.
Shutes A; Der CJ
Methods Enzymol; 2006; 407():9-22. PubMed ID: 16757310
[TBL] [Abstract][Full Text] [Related]
13. Mechanism of GTP hydrolysis by p21N-ras catalyzed by GAP: studies with a fluorescent GTP analogue.
Moore KJ; Webb MR; Eccleston JF
Biochemistry; 1993 Jul; 32(29):7451-9. PubMed ID: 8338843
[TBL] [Abstract][Full Text] [Related]
14. Linear free energy relationships in the intrinsic and GTPase activating protein-stimulated guanosine 5'-triphosphate hydrolysis of p21ras.
Schweins T; Geyer M; Kalbitzer HR; Wittinghofer A; Warshel A
Biochemistry; 1996 Nov; 35(45):14225-31. PubMed ID: 8916907
[TBL] [Abstract][Full Text] [Related]
15. Elucidating microscopic events driven by GTP hydrolysis reaction in the Ras-GAP system with semi-reactive molecular dynamics simulations: the alternative role of a phosphate binding loop for mechanical energy storage.
Kurisaki I; Tanaka S
Phys Chem Chem Phys; 2021 Dec; 23(46):26151-26164. PubMed ID: 34797363
[TBL] [Abstract][Full Text] [Related]
16. Interaction of GTPase-activating protein with p21ras, measured using a continuous assay for inorganic phosphate release.
Webb MR; Hunter JL
Biochem J; 1992 Oct; 287 ( Pt 2)(Pt 2):555-9. PubMed ID: 1445214
[TBL] [Abstract][Full Text] [Related]
17. On the mechanism of guanosine triphosphate hydrolysis in ras p21 proteins.
Langen R; Schweins T; Warshel A
Biochemistry; 1992 Sep; 31(37):8691-6. PubMed ID: 1390653
[TBL] [Abstract][Full Text] [Related]
18. Transition state structures and the roles of catalytic residues in GAP-facilitated GTPase of Ras as elucidated by (18)O kinetic isotope effects.
Du X; Sprang SR
Biochemistry; 2009 Jun; 48(21):4538-47. PubMed ID: 19610677
[TBL] [Abstract][Full Text] [Related]
19. Coupling of ras p21 signalling and GTP hydrolysis by GTPase activating proteins.
McCormick F
Philos Trans R Soc Lond B Biol Sci; 1992 Apr; 336(1276):43-7; discussion 47-8. PubMed ID: 1351295
[TBL] [Abstract][Full Text] [Related]
20. Relevance of the kinetic equilibrium of forces to the control of the cell cycle by Ras proteins.
Becker EW
Biol Chem; 2004 Jan; 385(1):41-7. PubMed ID: 14977045
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
