358 related articles for article (PubMed ID: 26384415)
1. ENmix: a novel background correction method for Illumina HumanMethylation450 BeadChip.
Xu Z; Niu L; Li L; Taylor JA
Nucleic Acids Res; 2016 Feb; 44(3):e20. PubMed ID: 26384415
[TBL] [Abstract][Full Text] [Related]
2. RCP: a novel probe design bias correction method for Illumina Methylation BeadChip.
Niu L; Xu Z; Taylor JA
Bioinformatics; 2016 Sep; 32(17):2659-63. PubMed ID: 27153672
[TBL] [Abstract][Full Text] [Related]
3. RELIC: a novel dye-bias correction method for Illumina Methylation BeadChip.
Xu Z; Langie SA; De Boever P; Taylor JA; Niu L
BMC Genomics; 2017 Jan; 18(1):4. PubMed ID: 28049437
[TBL] [Abstract][Full Text] [Related]
4. The ENmix DNA methylation analysis pipeline for Illumina BeadChip and comparisons with seven other preprocessing pipelines.
Xu Z; Niu L; Taylor JA
Clin Epigenetics; 2021 Dec; 13(1):216. PubMed ID: 34886879
[TBL] [Abstract][Full Text] [Related]
5. Impact of SNPs on methylation readouts by Illumina Infinium HumanMethylation450 BeadChip Array: implications for comparative population studies.
Daca-Roszak P; Pfeifer A; Żebracka-Gala J; Rusinek D; Szybińska A; Jarząb B; Witt M; Ziętkiewicz E
BMC Genomics; 2015 Nov; 16():1003. PubMed ID: 26607064
[TBL] [Abstract][Full Text] [Related]
6. A coherent approach for analysis of the Illumina HumanMethylation450 BeadChip improves data quality and performance in epigenome-wide association studies.
Lehne B; Drong AW; Loh M; Zhang W; Scott WR; Tan ST; Afzal U; Scott J; Jarvelin MR; Elliott P; McCarthy MI; Kooner JS; Chambers JC
Genome Biol; 2015 Feb; 16(1):37. PubMed ID: 25853392
[TBL] [Abstract][Full Text] [Related]
7. An evaluation of processing methods for HumanMethylation450 BeadChip data.
Liu J; Siegmund KD
BMC Genomics; 2016 Jun; 17():469. PubMed ID: 27334613
[TBL] [Abstract][Full Text] [Related]
8. SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips.
Maksimovic J; Gordon L; Oshlack A
Genome Biol; 2012 Jun; 13(6):R44. PubMed ID: 22703947
[TBL] [Abstract][Full Text] [Related]
9. Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.
Touleimat N; Tost J
Epigenomics; 2012 Jun; 4(3):325-41. PubMed ID: 22690668
[TBL] [Abstract][Full Text] [Related]
10. SMETHILLIUM: spatial normalization method for Illumina infinium HumanMethylation BeadChip.
Sabbah C; Mazo G; Paccard C; Reyal F; Hupé P
Bioinformatics; 2011 Jun; 27(12):1693-5. PubMed ID: 21493659
[TBL] [Abstract][Full Text] [Related]
11. A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data.
Teschendorff AE; Marabita F; Lechner M; Bartlett T; Tegner J; Gomez-Cabrero D; Beck S
Bioinformatics; 2013 Jan; 29(2):189-96. PubMed ID: 23175756
[TBL] [Abstract][Full Text] [Related]
12. Predicting CpG methylation levels by integrating Infinium HumanMethylation450 BeadChip array data.
Fan S; Huang K; Ai R; Wang M; Wang W
Genomics; 2016 Apr; 107(4):132-7. PubMed ID: 26921858
[TBL] [Abstract][Full Text] [Related]
13. Reliability of DNA methylation measures using Illumina methylation BeadChip.
Xu Z; Taylor JA
Epigenetics; 2021 May; 16(5):495-502. PubMed ID: 32749174
[TBL] [Abstract][Full Text] [Related]
14. Evaluation of the Infinium Methylation 450K technology.
Dedeurwaerder S; Defrance M; Calonne E; Denis H; Sotiriou C; Fuks F
Epigenomics; 2011 Dec; 3(6):771-84. PubMed ID: 22126295
[TBL] [Abstract][Full Text] [Related]
15. Batch-effect detection, correction and characterisation in Illumina HumanMethylation450 and MethylationEPIC BeadChip array data.
Ross JP; van Dijk S; Phang M; Skilton MR; Molloy PL; Oytam Y
Clin Epigenetics; 2022 Apr; 14(1):58. PubMed ID: 35488315
[TBL] [Abstract][Full Text] [Related]
16. Agreement in DNA methylation levels from the Illumina 450K array across batches, tissues, and time.
Forest M; O'Donnell KJ; Voisin G; Gaudreau H; MacIsaac JL; McEwen LM; Silveira PP; Steiner M; Kobor MS; Meaney MJ; Greenwood CMT
Epigenetics; 2018; 13(1):19-32. PubMed ID: 29381404
[TBL] [Abstract][Full Text] [Related]
17. "Gap hunting" to characterize clustered probe signals in Illumina methylation array data.
Andrews SV; Ladd-Acosta C; Feinberg AP; Hansen KD; Fallin MD
Epigenetics Chromatin; 2016; 9():56. PubMed ID: 27980682
[TBL] [Abstract][Full Text] [Related]
18. Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing.
Almeida D; Skov I; Lund J; Mohammadnejad A; Silva A; Vandin F; Tan Q; Baumbach J; Röttger R
J Integr Bioinform; 2016 Dec; 13(4):294. PubMed ID: 28187410
[TBL] [Abstract][Full Text] [Related]
19. A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip.
Wang Z; Wu X; Wang Y
BMC Bioinformatics; 2018 Apr; 19(Suppl 5):115. PubMed ID: 29671397
[TBL] [Abstract][Full Text] [Related]
20. Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data.
Morris TJ; Beck S
Methods; 2015 Jan; 72():3-8. PubMed ID: 25233806
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
