These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

230 related articles for article (PubMed ID: 26388177)

  • 1. Reconstruction of novel transcription factor regulons through inference of their binding sites.
    Elmas A; Wang X; Samoilov MS
    BMC Bioinformatics; 2015 Sep; 16():299. PubMed ID: 26388177
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
    Rodionov DA; Novichkov PS; Stavrovskaya ED; Rodionova IA; Li X; Kazanov MD; Ravcheev DA; Gerasimova AV; Kazakov AE; Kovaleva GY; Permina EA; Laikova ON; Overbeek R; Romine MF; Fredrickson JK; Arkin AP; Dubchak I; Osterman AL; Gelfand MS
    BMC Genomics; 2011 Jun; 12 Suppl 1(Suppl 1):S3. PubMed ID: 21810205
    [TBL] [Abstract][Full Text] [Related]  

  • 3. GntR Family of Bacterial Transcription Factors and Their DNA Binding Motifs: Structure, Positioning and Co-Evolution.
    Suvorova IA; Korostelev YD; Gelfand MS
    PLoS One; 2015; 10(7):e0132618. PubMed ID: 26151451
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA.
    Benítez-Bellón E; Moreno-Hagelsieb G; Collado-Vides J
    Genome Biol; 2002; 3(3):RESEARCH0013. PubMed ID: 11897025
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computational analysis of LexA regulons in Cyanobacteria.
    Li S; Xu M; Su Z
    BMC Genomics; 2010 Sep; 11():527. PubMed ID: 20920248
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparative genomics of pyridoxal 5'-phosphate-dependent transcription factor regulons in
    Suvorova IA; Rodionov DA
    Microb Genom; 2016 Jan; 2(1):e000047. PubMed ID: 28348826
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genomic reconstruction of the transcriptional regulatory network in Bacillus subtilis.
    Leyn SA; Kazanov MD; Sernova NV; Ermakova EO; Novichkov PS; Rodionov DA
    J Bacteriol; 2013 Jun; 195(11):2463-73. PubMed ID: 23504016
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparative genomics and evolution of transcriptional regulons in
    Leyn SA; Suvorova IA; Kazakov AE; Ravcheev DA; Stepanova VV; Novichkov PS; Rodionov DA
    Microb Genom; 2016 Jul; 2(7):e000061. PubMed ID: 28348857
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational identification of the Spo0A-phosphate regulon that is essential for the cellular differentiation and development in Gram-positive spore-forming bacteria.
    Liu J; Tan K; Stormo GD
    Nucleic Acids Res; 2003 Dec; 31(23):6891-903. PubMed ID: 14627822
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A comparative genomics approach to prediction of new members of regulons.
    Tan K; Moreno-Hagelsieb G; Collado-Vides J; Stormo GD
    Genome Res; 2001 Apr; 11(4):566-84. PubMed ID: 11282972
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.
    Qin ZS; McCue LA; Thompson W; Mayerhofer L; Lawrence CE; Liu JS
    Nat Biotechnol; 2003 Apr; 21(4):435-9. PubMed ID: 12627170
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of additional genes belonging to the LexA regulon in Escherichia coli.
    Fernández De Henestrosa AR; Ogi T; Aoyagi S; Chafin D; Hayes JJ; Ohmori H; Woodgate R
    Mol Microbiol; 2000 Mar; 35(6):1560-72. PubMed ID: 10760155
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Inferred regulons are consistent with regulator binding sequences in E. coli.
    Qiu S; Wan X; Liang Y; Lamoureux CR; Akbari A; Palsson BO; Zielinski DC
    PLoS Comput Biol; 2024 Jan; 20(1):e1011824. PubMed ID: 38252668
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Reconstruction of Escherichia coli transcriptional regulatory networks via regulon-based associations.
    Zare H; Sangurdekar D; Srivastava P; Kaveh M; Khodursky A
    BMC Syst Biol; 2009 Apr; 3():39. PubMed ID: 19366454
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identification of LexA regulated promoters in Escherichia coli O157:H7.
    Yaguchi K; Mikami T; Igari K; Yoshida Y; Yokoyama K; Makino K
    J Gen Appl Microbiol; 2011; 57(4):219-30. PubMed ID: 21914970
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A generic approach to identify Transcription Factor-specific operator motifs; Inferences for LacI-family mediated regulation in Lactobacillus plantarum WCFS1.
    Francke C; Kerkhoven R; Wels M; Siezen RJ
    BMC Genomics; 2008 Mar; 9():145. PubMed ID: 18371204
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conservation of the LexA repressor binding site in Deinococcus radiodurans.
    Khan F; Singh SP; Mishra BN
    J Integr Bioinform; 2008 Jan; 5(1):. PubMed ID: 20134056
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Use of LexA-based system to identify protein-protein interactions in vivo.
    Daines DA; Granger-Schnarr M; Dimitrova M; Silver RP
    Methods Enzymol; 2002; 358():153-61. PubMed ID: 12474385
    [No Abstract]   [Full Text] [Related]  

  • 19. The Escherichia coli Fur pan-regulon has few conserved but many unique regulatory targets.
    Gao Y; Bang I; Seif Y; Kim D; Palsson BO
    Nucleic Acids Res; 2023 May; 51(8):3618-3630. PubMed ID: 37026477
    [TBL] [Abstract][Full Text] [Related]  

  • 20. In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon.
    Erill I; Escribano M; Campoy S; Barbé J
    Bioinformatics; 2003 Nov; 19(17):2225-36. PubMed ID: 14630651
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.