BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

342 related articles for article (PubMed ID: 26418477)

  • 1. Topologically Associating Domains: An invariant framework or a dynamic scaffold?
    Cubeñas-Potts C; Corces VG
    Nucleus; 2015; 6(6):430-4. PubMed ID: 26418477
    [TBL] [Abstract][Full Text] [Related]  

  • 2. 5C analysis of the Epidermal Differentiation Complex locus reveals distinct chromatin interaction networks between gene-rich and gene-poor TADs in skin epithelial cells.
    Poterlowicz K; Yarker JL; Malashchuk I; Lajoie BR; Mardaryev AN; Gdula MR; Sharov AA; Kohwi-Shigematsu T; Botchkarev VA; Fessing MY
    PLoS Genet; 2017 Sep; 13(9):e1006966. PubMed ID: 28863138
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Widespread rearrangement of 3D chromatin organization underlies polycomb-mediated stress-induced silencing.
    Li L; Lyu X; Hou C; Takenaka N; Nguyen HQ; Ong CT; Cubeñas-Potts C; Hu M; Lei EP; Bosco G; Qin ZS; Corces VG
    Mol Cell; 2015 Apr; 58(2):216-31. PubMed ID: 25818644
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders.
    Gómez-Marín C; Tena JJ; Acemel RD; López-Mayorga M; Naranjo S; de la Calle-Mustienes E; Maeso I; Beccari L; Aneas I; Vielmas E; Bovolenta P; Nobrega MA; Carvajal J; Gómez-Skarmeta JL
    Proc Natl Acad Sci U S A; 2015 Jun; 112(24):7542-7. PubMed ID: 26034287
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
    Khoury A; Achinger-Kawecka J; Bert SA; Smith GC; French HJ; Luu PL; Peters TJ; Du Q; Parry AJ; Valdes-Mora F; Taberlay PC; Stirzaker C; Statham AL; Clark SJ
    Nat Commun; 2020 Jan; 11(1):54. PubMed ID: 31911579
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Insulator function and topological domain border strength scale with architectural protein occupancy.
    Van Bortle K; Nichols MH; Li L; Ong CT; Takenaka N; Qin ZS; Corces VG
    Genome Biol; 2014 Jun; 15(6):R82. PubMed ID: 24981874
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Chromatin architecture reorganization during neuronal cell differentiation in
    Chathoth KT; Zabet NR
    Genome Res; 2019 Apr; 29(4):613-625. PubMed ID: 30709849
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture.
    Cubeñas-Potts C; Rowley MJ; Lyu X; Li G; Lei EP; Corces VG
    Nucleic Acids Res; 2017 Feb; 45(4):1714-1730. PubMed ID: 27899590
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Contribution of transposable elements and distal enhancers to evolution of human-specific features of interphase chromatin architecture in embryonic stem cells.
    Glinsky GV
    Chromosome Res; 2018 Mar; 26(1-2):61-84. PubMed ID: 29335803
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock.
    Ray J; Munn PR; Vihervaara A; Lewis JJ; Ozer A; Danko CG; Lis JT
    Proc Natl Acad Sci U S A; 2019 Sep; 116(39):19431-19439. PubMed ID: 31506350
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The connection between BRG1, CTCF and topoisomerases at TAD boundaries.
    Barutcu AR; Lian JB; Stein JL; Stein GS; Imbalzano AN
    Nucleus; 2017 Mar; 8(2):150-155. PubMed ID: 28060558
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains.
    Ulianov SV; Khrameeva EE; Gavrilov AA; Flyamer IM; Kos P; Mikhaleva EA; Penin AA; Logacheva MD; Imakaev MV; Chertovich A; Gelfand MS; Shevelyov YY; Razin SV
    Genome Res; 2016 Jan; 26(1):70-84. PubMed ID: 26518482
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Comparative analyses of CTCF and BORIS occupancies uncover two distinct classes of CTCF binding genomic regions.
    Pugacheva EM; Rivero-Hinojosa S; Espinoza CA; Méndez-Catalá CF; Kang S; Suzuki T; Kosaka-Suzuki N; Robinson S; Nagarajan V; Ye Z; Boukaba A; Rasko JE; Strunnikov AV; Loukinov D; Ren B; Lobanenkov VV
    Genome Biol; 2015 Aug; 16(1):161. PubMed ID: 26268681
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TAD-free analysis of architectural proteins and insulators.
    Mourad R; Cuvier O
    Nucleic Acids Res; 2018 Mar; 46(5):e27. PubMed ID: 29272504
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Chromatin Insulators and Topological Domains: Adding New Dimensions to 3D Genome Architecture.
    Matharu NK; Ahanger SH
    Genes (Basel); 2015 Sep; 6(3):790-811. PubMed ID: 26340639
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Structural heterogeneity and functional diversity of topologically associating domains in mammalian genomes.
    Wang XT; Dong PF; Zhang HY; Peng C
    Nucleic Acids Res; 2015 Sep; 43(15):7237-46. PubMed ID: 26150425
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Invariant TAD Boundaries Constrain Cell-Type-Specific Looping Interactions between Promoters and Distal Elements around the CFTR Locus.
    Smith EM; Lajoie BR; Jain G; Dekker J
    Am J Hum Genet; 2016 Jan; 98(1):185-201. PubMed ID: 26748519
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Organizational principles of 3D genome architecture.
    Rowley MJ; Corces VG
    Nat Rev Genet; 2018 Dec; 19(12):789-800. PubMed ID: 30367165
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Quantitative differences in TAD border strength underly the TAD hierarchy in Drosophila chromosomes.
    Luzhin AV; Flyamer IM; Khrameeva EE; Ulianov SV; Razin SV; Gavrilov AA
    J Cell Biochem; 2019 Mar; 120(3):4494-4503. PubMed ID: 30260021
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CTCF fences make good neighbours.
    Krivega I; Dean A
    Nat Cell Biol; 2017 Jul; 19(8):883-885. PubMed ID: 28752854
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.