These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

139 related articles for article (PubMed ID: 26454274)

  • 1. FogLight: an efficient matrix-based approach to construct metabolic pathways by search space reduction.
    Khosraviani M; Saheb Zamani M; Bidkhori G
    Bioinformatics; 2016 Feb; 32(3):398-408. PubMed ID: 26454274
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Optimal metabolic route search based on atom mappings.
    Latendresse M; Krummenacker M; Karp PD
    Bioinformatics; 2014 Jul; 30(14):2043-50. PubMed ID: 24642060
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Efficient searching and annotation of metabolic networks using chemical similarity.
    Pertusi DA; Stine AE; Broadbelt LJ; Tyo KE
    Bioinformatics; 2015 Apr; 31(7):1016-24. PubMed ID: 25417203
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Using flux balance analysis to guide microbial metabolic engineering.
    Curran KA; Crook NC; Alper HS
    Methods Mol Biol; 2012; 834():197-216. PubMed ID: 22144361
    [TBL] [Abstract][Full Text] [Related]  

  • 5. FindPath: a Matlab solution for in silico design of synthetic metabolic pathways.
    Vieira G; Carnicer M; Portais JC; Heux S
    Bioinformatics; 2014 Oct; 30(20):2986-8. PubMed ID: 24994891
    [TBL] [Abstract][Full Text] [Related]  

  • 6. tEFMA: computing thermodynamically feasible elementary flux modes in metabolic networks.
    Gerstl MP; Jungreuthmayer C; Zanghellini J
    Bioinformatics; 2015 Jul; 31(13):2232-4. PubMed ID: 25701571
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparing methods for metabolic network analysis and an application to metabolic engineering.
    Tomar N; De RK
    Gene; 2013 May; 521(1):1-14. PubMed ID: 23537990
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Inferring branching pathways in genome-scale metabolic networks.
    Pitkänen E; Jouhten P; Rousu J
    BMC Syst Biol; 2009 Oct; 3():103. PubMed ID: 19874610
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational tools for guided discovery and engineering of metabolic pathways.
    Moura M; Broadbelt L; Tyo K
    Methods Mol Biol; 2013; 985():123-47. PubMed ID: 23417803
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Robust design of microbial strains.
    Costanza J; Carapezza G; Angione C; Lió P; Nicosia G
    Bioinformatics; 2012 Dec; 28(23):3097-104. PubMed ID: 23044547
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Finding metabolic pathways using atom tracking.
    Heath AP; Bennett GN; Kavraki LE
    Bioinformatics; 2010 Jun; 26(12):1548-55. PubMed ID: 20421197
    [TBL] [Abstract][Full Text] [Related]  

  • 12. NIHBA: a network interdiction approach for metabolic engineering design.
    Jiang S; Wang Y; Kaiser M; Krasnogor N
    Bioinformatics; 2020 Jun; 36(11):3482-3492. PubMed ID: 32167529
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Fast-SNP: a fast matrix pre-processing algorithm for efficient loopless flux optimization of metabolic models.
    Saa PA; Nielsen LK
    Bioinformatics; 2016 Dec; 32(24):3807-3814. PubMed ID: 27559155
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An evolutionary approach for searching metabolic pathways.
    Gerard MF; Stegmayer G; Milone DH
    Comput Biol Med; 2013 Nov; 43(11):1704-12. PubMed ID: 24209916
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A stochastic model for the evolution of metabolic networks with neighbor dependence.
    Mithani A; Preston GM; Hein J
    Bioinformatics; 2009 Jun; 25(12):1528-35. PubMed ID: 19376826
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ArtPathDesign: rational heterologous pathway design system for the production of nonnative metabolites.
    Chatsurachai S; Furusawa C; Shimizu H
    J Biosci Bioeng; 2013 Oct; 116(4):524-7. PubMed ID: 23664926
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Finding branched pathways in metabolic network via atom group tracking.
    Huang Y; Xie Y; Zhong C; Zhou F
    PLoS Comput Biol; 2021 Feb; 17(2):e1008676. PubMed ID: 33529200
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Retrosynthetic design of heterologous pathways.
    Carbonell P; Planson AG; Faulon JL
    Methods Mol Biol; 2013; 985():149-73. PubMed ID: 23417804
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Expanding Metabolic Capabilities Using Novel Pathway Designs: Computational Tools and Case Studies.
    Saa PA; Cortés MP; López J; Bustos D; Maass A; Agosin E
    Biotechnol J; 2019 Sep; 14(9):e1800734. PubMed ID: 31140756
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DEF: an automated dead-end filling approach based on quasi-endosymbiosis.
    Liu L; Zhang Z; Sheng T; Chen M
    Bioinformatics; 2017 Feb; 33(3):405-413. PubMed ID: 28171511
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.